Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8066A05.3 |
| Conread position: | 9-338 |
| Cow position: | chr26:18847533-18847864 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 88 |
| Conread position: | 21-338 |
| Cow position: | chr26:34857769-34857445 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 24, 8 |
| Conread position: | 38-310 |
| Cow position: | chr26:11989109-11989382 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 38-333 |
| Cow position: | chr26:12264364-12264081 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 216, 12 |
| Conread position: | 42-280 |
| Cow position: | chr26:2921358-2921609 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 46-337 |
| Cow position: | chr26:15627395-15627114 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 15, 175 |
| Conread position: | 77-334 |
| Cow position: | chr26:18490680-18490937 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 66 |
| Conread position: | 77-334 |
| Cow position: | chr26:18508019-18508276 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 66 |
| Conread position: | 90-242 |
| Cow position: | chr26:26673958-26674109 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 90-243 |
| Cow position: | chr26:13743537-13743386 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 90-255 |
| Cow position: | chr26:11823713-11823547 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 90-332 |
| Cow position: | chr26:35105555-35105789 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 197, 35 |
| Conread position: | 90-336 |
| Cow position: | chr26:19761563-19761801 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 90-337 |
| Cow position: | chr26:1542511-1542750 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 90-337 |
| Cow position: | chr26:6530195-6529956 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 90-337 |
| Cow position: | chr26:19167758-19167507 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 136, 101 |
| Conread position: | 90-338 |
| Cow position: | chr26:31954379-31954131 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 130, 96 |
| Conread position: | 90-346 |
| Cow position: | chr26:29776205-29775948 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 90-363 |
| Cow position: | chr26:28697497-28697218 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 74, 172 |
| Conread position: | 91-360 |
| Cow position: | chr26:7062083-7062352 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 65, 86 |
| Conread position: | 92-292 |
| Cow position: | chr26:24954541-24954743 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 92-308 |
| Cow position: | chr26:10990514-10990300 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 102 |
| Conread position: | 92-343 |
| Cow position: | chr26:6604928-6605161 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 162, 46 |
| Conread position: | 97-346 |
| Cow position: | chr26:34782517-34782267 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 123, 170 |
| Conread position: | 108-338 |
| Cow position: | chr26:12886417-12886182 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 32, 199 |
| Conread position: | 116-353 |
| Cow position: | chr26:11054201-11054430 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 130-329 |
| Cow position: | chr26:20978270-20978069 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 216-342 |
| Cow position: | chr26:22024010-22023883 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.