Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8066A05.3 |
| Conread position: | 9-336 |
| Cow position: | chr27:3911961-3912291 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 80 |
| Conread position: | 23-337 |
| Cow position: | chr27:23052521-23052838 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 71 |
| Conread position: | 35-346 |
| Cow position: | chr27:29498665-29498972 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 120, 24 |
| Conread position: | 42-337 |
| Cow position: | chr27:29358756-29359050 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 182, 43 |
| Conread position: | 42-353 |
| Cow position: | chr27:14139293-14138980 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 44-281 |
| Cow position: | chr27:18109797-18109559 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 50-343 |
| Cow position: | chr27:14151927-14152218 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 9 |
| Conread position: | 52-337 |
| Cow position: | chr27:30247100-30247375 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 69-338 |
| Cow position: | chr27:3695132-3694865 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 8, 115 |
| Conread position: | 73-337 |
| Cow position: | chr27:7086236-7086496 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 118 |
| Conread position: | 73-337 |
| Cow position: | chr27:23877515-23877774 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 16 |
| Conread position: | 77-317 |
| Cow position: | chr27:22123966-22123724 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 88, 165 |
| Conread position: | 77-329 |
| Cow position: | chr27:22125292-22125547 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 71, 65 |
| Conread position: | 77-338 |
| Cow position: | chr27:29996016-29996274 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 11 |
| Conread position: | 77-352 |
| Cow position: | chr27:20754447-20754178 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 7, 14 |
| Conread position: | 79-338 |
| Cow position: | chr27:14181750-14181499 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 93, 58 |
| Conread position: | 88-244 |
| Cow position: | chr27:29522963-29523118 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 89-305 |
| Cow position: | chr27:26502044-26501832 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 132, 99 |
| Conread position: | 90-244 |
| Cow position: | chr27:29489518-29489364 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 90-316 |
| Cow position: | chr27:14681153-14680926 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 90-317 |
| Cow position: | chr27:530656-530880 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 134, 102 |
| Conread position: | 90-337 |
| Cow position: | chr27:58072-58311 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 90-337 |
| Cow position: | chr27:18467532-18467293 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 90-337 |
| Cow position: | chr27:30988296-30988054 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 90-342 |
| Cow position: | chr27:14333750-14333501 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 127, 86 |
| Conread position: | 90-345 |
| Cow position: | chr27:21527946-21527698 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 90-353 |
| Cow position: | chr27:22567826-22567566 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 101 |
| Conread position: | 91-244 |
| Cow position: | chr27:2392440-2392593 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 91-321 |
| Cow position: | chr27:23190441-23190672 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 163, 132 |
| Conread position: | 91-337 |
| Cow position: | chr27:26813175-26812935 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 92-336 |
| Cow position: | chr27:22803610-22803841 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 92-337 |
| Cow position: | chr27:21601157-21601393 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 100-355 |
| Cow position: | chr27:3082984-3082728 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 177 |
| Conread position: | 139-337 |
| Cow position: | chr27:7634444-7634642 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 81, 127 |
| Conread position: | 140-337 |
| Cow position: | chr27:22989522-22989333 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
Show alignments to all cow chromosomes.