Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8066A05.3 |
| Conread position: | 9-343 |
| Cow position: | chr28:30947074-30946744 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 19-308 |
| Cow position: | chr28:4547439-4547729 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 20-354 |
| Cow position: | chr28:32649051-32649392 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 38-321 |
| Cow position: | chr28:2370756-2370478 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 206 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 52-337 |
| Cow position: | chr28:7239142-7238855 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 65-352 |
| Cow position: | chr28:19106030-19105744 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 20 |
| Conread position: | 73-338 |
| Cow position: | chr28:22969029-22969299 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 85, 213 |
| Conread position: | 77-252 |
| Cow position: | chr28:23344399-23344576 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 77-261 |
| Cow position: | chr28:17529294-17529111 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 76, 100 |
| Conread position: | 77-353 |
| Cow position: | chr28:29984677-29984943 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 140, 53 |
| Conread position: | 87-337 |
| Cow position: | chr28:23798830-23799066 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 89-332 |
| Cow position: | chr28:74376-74611 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 90-337 |
| Cow position: | chr28:91601-91840 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 90-337 |
| Cow position: | chr28:513674-513913 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 90-337 |
| Cow position: | chr28:13771560-13771324 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 90-337 |
| Cow position: | chr28:28730909-28730669 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 91-337 |
| Cow position: | chr28:80495-80733 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 97-272 |
| Cow position: | chr28:9417495-9417672 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 100-283 |
| Cow position: | chr28:34736387-34736197 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 127-346 |
| Cow position: | chr28:5341018-5341242 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 31, 179 |
| Conread position: | 140-337 |
| Cow position: | chr28:4130154-4129957 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 114, 83 |
Show alignments to all cow chromosomes.