Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8066A05.3
        

               Conread position:
               9-352
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               32, 185
               

               Conread position:
               19-337
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               12, 168
               

               Conread position:
               19-352
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 53
               

               Conread position:
               26-331
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               15, 63
               

               Conread position:
               34-336
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 16
               

               Conread position:
               38-252
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               75, 50
               

               Conread position:
               38-332
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               216, 21
               

               Conread position:
               38-334
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               174, 12
               

               Conread position:
               38-337
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               175, 147
               

               Conread position:
               40-343
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 74
               

               Conread position:
               42-352
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               148, 58
               

               Conread position:
               52-333
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               199, 36
               

               Conread position:
               52-337
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               171, 15
               

               Conread position:
               65-335
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               81, 23
               

               Conread position:
               65-338
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               155, 23
               

               Conread position:
               71-355
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               76-355
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               77-337
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               75, 55
               

               Conread position:
               77-343
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               84, 156
               

               Conread position:
               78-337
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               87-281
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               87-337
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               88-239
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-242
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-244
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               133, 109
               

               Conread position:
               90-244
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-253
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               90-262
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               162, 101
               

               Conread position:
               90-320
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               66, 103
               

               Conread position:
               90-333
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               80, 106
               

               Conread position:
               90-333
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               131, 56
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               207, 155
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               184, 144
               

               Conread position:
               90-346
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               66, 12
               

               Conread position:
               90-352
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               91-333
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 150
               

               Conread position:
               91-352
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               92-337
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               93-353
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               65, 100
               

               Conread position:
               97-283
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               97-335
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 149
               

               Conread position:
               100-346
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               60, 92
               

               Conread position:
               100-354
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 176
               

               Conread position:
               100-354
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 178
               

               Conread position:
               102-238
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               116-354
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 156
               

               Conread position:
               121-343
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               39, 71
               
Show alignments to all cow chromosomes.