Cow genome map
Conread name: | Ss1.1-Pig4-TMW8066A05.3 |
Conread position: | 4-355 |
Cow position: | chr5:18584936-18585292 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 137 |
Conread position: | 8-322 |
Cow position: | chr5:2441330-2441014 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 59 |
Conread position: | 9-322 |
Cow position: | chr5:72939711-72939394 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 222 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 31, 86 |
Conread position: | 9-337 |
Cow position: | chr5:29537140-29536797 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 82 |
Conread position: | 9-355 |
Cow position: | chr5:64104050-64103701 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 20 |
Conread position: | 9-360 |
Cow position: | chr5:21514907-21514572 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 251 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 23, 82 |
Conread position: | 12-320 |
Cow position: | chr5:64796123-64796430 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 12 |
Conread position: | 12-337 |
Cow position: | chr5:66106591-66106922 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 49 |
Conread position: | 12-343 |
Cow position: | chr5:47619629-47619302 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 12 |
Conread position: | 12-346 |
Cow position: | chr5:25896457-25896126 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 225 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 74, 48 |
Conread position: | 19-342 |
Cow position: | chr5:75573426-75573100 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 33 |
Conread position: | 23-198 |
Cow position: | chr5:18709859-18710033 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 133 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 43, 34 |
Conread position: | 23-338 |
Cow position: | chr5:42183442-42183124 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 67 |
Conread position: | 34-337 |
Cow position: | chr5:19914495-19914794 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 220 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 7, 62 |
Conread position: | 42-313 |
Cow position: | chr5:42785632-42785361 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 46 |
Conread position: | 42-329 |
Cow position: | chr5:48275290-48275002 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 202 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 164, 209 |
Conread position: | 44-271 |
Cow position: | chr5:39800813-39800576 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 175 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 11, 46 |
Conread position: | 47-322 |
Cow position: | chr5:37372051-37372336 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 206 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 47-322 |
Cow position: | chr5:47839996-47839717 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 199 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 20, 40 |
Conread position: | 47-333 |
Cow position: | chr5:63515896-63515616 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 206 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 207, 41 |
Conread position: | 48-308 |
Cow position: | chr5:49920300-49920559 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 181 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 111, 25 |
Conread position: | 50-333 |
Cow position: | chr5:30204547-30204820 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 38 |
Conread position: | 73-337 |
Cow position: | chr5:21042920-21043187 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 200 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 181, 61 |
Conread position: | 77-233 |
Cow position: | chr5:53638087-53638244 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 115 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 77-348 |
Cow position: | chr5:9969511-9969780 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 115 |
Conread position: | 78-317 |
Cow position: | chr5:7283780-7283544 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 162 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 54, 109 |
Conread position: | 90-242 |
Cow position: | chr5:67962423-67962575 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 90-244 |
Cow position: | chr5:73887934-73887780 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 112 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 90-291 |
Cow position: | chr5:9368673-9368866 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 151 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 90-333 |
Cow position: | chr5:64038918-64039157 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 175 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 11, 155 |
Conread position: | 90-336 |
Cow position: | chr5:70720725-70720485 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 174 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 127, 17 |
Conread position: | 90-337 |
Cow position: | chr5:24456387-24456150 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 173 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 157, 0 |
Conread position: | 90-337 |
Cow position: | chr5:42100019-42099782 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 178 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 90-337 |
Cow position: | chr5:46273343-46273104 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 170 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 90-337 |
Cow position: | chr5:47357836-47358072 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 179 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 91, 102 |
Conread position: | 90-337 |
Cow position: | chr5:60969266-60969506 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 177 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 62, 156 |
Conread position: | 90-360 |
Cow position: | chr5:42820235-42820503 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 175 |
Conread position: | 91-337 |
Cow position: | chr5:13420983-13421221 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 172 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 154, 0 |
Conread position: | 91-337 |
Cow position: | chr5:23628484-23628729 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 187 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 133, 47 |
Conread position: | 91-337 |
Cow position: | chr5:70705039-70705279 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 177 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 163, 115 |
Conread position: | 92-328 |
Cow position: | chr5:73480304-73480070 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 167 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 161, 63 |
Conread position: | 95-336 |
Cow position: | chr5:56260474-56260703 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 167 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 97-322 |
Cow position: | chr5:29076000-29076229 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 172 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 97-343 |
Cow position: | chr5:17737099-17737347 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 174 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 64, 228 |
Conread position: | 100-353 |
Cow position: | chr5:48135707-48135954 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 190 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 63, 16 |
Conread position: | 100-354 |
Cow position: | chr5:8764338-8764593 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 177 |
Conread position: | 100-354 |
Cow position: | chr5:47996450-47996194 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 178 |
Conread position: | 102-346 |
Cow position: | chr5:5058500-5058735 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 169 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 57, 32 |
Conread position: | 102-354 |
Cow position: | chr5:24888638-24888890 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 188 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 56, 79 |
Conread position: | 108-354 |
Cow position: | chr5:12219217-12219464 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 187 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 112, 67 |
Conread position: | 116-334 |
Cow position: | chr5:23742434-23742648 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 153 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 56, 71 |
Conread position: | 123-346 |
Cow position: | chr5:18657605-18657833 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 170 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 37, 183 |
Conread position: | 123-346 |
Cow position: | chr5:47991630-47991403 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 175 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 37, 182 |
Conread position: | 129-304 |
Cow position: | chr5:27995936-27996113 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 125 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 20, 96 |
Conread position: | 202-343 |
Cow position: | chr5:58439414-58439556 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 19, 140 |
Show alignments to all cow chromosomes.