Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8066A05.3 |
| Conread position: | 1-340 |
| Cow position: | chr7:63334519-63334873 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 66, 41 |
| Conread position: | 9-292 |
| Cow position: | chr7:11157639-11157931 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 209 |
| Conread position: | 9-343 |
| Cow position: | chr7:33597154-33596810 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 342 |
| Conread position: | 22-338 |
| Cow position: | chr7:161669-161346 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 23-346 |
| Cow position: | chr7:38470308-38470633 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 42-193 |
| Cow position: | chr7:41084413-41084563 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 42-337 |
| Cow position: | chr7:40909822-40909521 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 44-278 |
| Cow position: | chr7:19929915-19930147 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 50-333 |
| Cow position: | chr7:38469847-38470128 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 38 |
| Conread position: | 50-338 |
| Cow position: | chr7:50718373-50718664 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 9 |
| Conread position: | 67-352 |
| Cow position: | chr7:44617110-44617381 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 185, 49 |
| Conread position: | 70-244 |
| Cow position: | chr7:66164751-66164574 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 73-353 |
| Cow position: | chr7:30544815-30544533 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 76-338 |
| Cow position: | chr7:50754808-50754552 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 145, 44 |
| Conread position: | 77-336 |
| Cow position: | chr7:38811115-38810854 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 81-337 |
| Cow position: | chr7:51756153-51755893 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 74, 118 |
| Conread position: | 88-319 |
| Cow position: | chr7:25804726-25804970 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 88-346 |
| Cow position: | chr7:31108318-31108068 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 70, 23 |
| Conread position: | 89-337 |
| Cow position: | chr7:62014949-62014710 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 90-308 |
| Cow position: | chr7:47886655-47886431 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 90-332 |
| Cow position: | chr7:55975132-55974902 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 90-337 |
| Cow position: | chr7:5015015-5015254 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 90-337 |
| Cow position: | chr7:49058748-49058509 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 85, 90 |
| Conread position: | 90-337 |
| Cow position: | chr7:57380433-57380185 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 90-343 |
| Cow position: | chr7:25828711-25828962 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 192 |
| Conread position: | 90-343 |
| Cow position: | chr7:40900138-40899889 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 127, 103 |
| Conread position: | 91-333 |
| Cow position: | chr7:12266092-12266341 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 91-337 |
| Cow position: | chr7:2753053-2753296 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 162, 106 |
| Conread position: | 92-328 |
| Cow position: | chr7:3916373-3916613 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 99-337 |
| Cow position: | chr7:23349977-23349751 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 95, 80 |
| Conread position: | 100-354 |
| Cow position: | chr7:3662206-3661951 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 178 |
| Conread position: | 100-354 |
| Cow position: | chr7:18107893-18107643 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 63, 92 |
| Conread position: | 103-333 |
| Cow position: | chr7:9348882-9349120 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 119, 170 |
| Conread position: | 116-322 |
| Cow position: | chr7:13801071-13800863 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 27, 77 |
| Conread position: | 123-345 |
| Cow position: | chr7:11650076-11650301 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 123-346 |
| Cow position: | chr7:16140031-16140258 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 37, 182 |
| Conread position: | 141-337 |
| Cow position: | chr7:21834458-21834267 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 129, 104 |
Show alignments to all cow chromosomes.