Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8066A05.3 |
| Conread position: | 9-322 |
| Cow position: | chr8:46751080-46751389 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 9-333 |
| Cow position: | chr8:23704387-23704717 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 9-337 |
| Cow position: | chr8:3552035-3552364 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 83 |
| Conread position: | 42-333 |
| Cow position: | chr8:47801951-47802240 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 46 |
| Conread position: | 48-338 |
| Cow position: | chr8:12524713-12525001 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 50-337 |
| Cow position: | chr8:1365778-1365491 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 38 |
| Conread position: | 65-333 |
| Cow position: | chr8:33777268-33777536 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 91, 108 |
| Conread position: | 71-337 |
| Cow position: | chr8:61168924-61168654 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 35, 211 |
| Conread position: | 71-346 |
| Cow position: | chr8:29240529-29240804 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 87, 157 |
| Conread position: | 77-322 |
| Cow position: | chr8:25585145-25584911 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 177, 96 |
| Conread position: | 90-239 |
| Cow position: | chr8:59234509-59234658 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 90-244 |
| Cow position: | chr8:8573663-8573817 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 119, 124 |
| Conread position: | 90-303 |
| Cow position: | chr8:39880814-39880610 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 90-337 |
| Cow position: | chr8:5959196-5959433 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 90-337 |
| Cow position: | chr8:19396445-19396213 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 90-337 |
| Cow position: | chr8:21978129-21977890 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 90-337 |
| Cow position: | chr8:30549405-30549642 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 162, 101 |
| Conread position: | 90-337 |
| Cow position: | chr8:58150368-58150615 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 190, 153 |
| Conread position: | 90-342 |
| Cow position: | chr8:40113840-40113589 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 127, 145 |
| Conread position: | 90-343 |
| Cow position: | chr8:9076984-9076736 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 164, 102 |
| Conread position: | 90-346 |
| Cow position: | chr8:7419202-7418945 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 69, 50 |
| Conread position: | 90-363 |
| Cow position: | chr8:9701561-9701304 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 39 |
| Conread position: | 91-343 |
| Cow position: | chr8:45966103-45966361 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 101, 73 |
| Conread position: | 92-302 |
| Cow position: | chr8:36296217-36296422 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 92-328 |
| Cow position: | chr8:12576667-12576900 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 162, 63 |
| Conread position: | 92-337 |
| Cow position: | chr8:48707516-48707753 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 95-346 |
| Cow position: | chr8:37094353-37094607 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 95-353 |
| Cow position: | chr8:36295274-36295013 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 8, 175 |
| Conread position: | 96-260 |
| Cow position: | chr8:53044064-53044228 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 97-337 |
| Cow position: | chr8:5650092-5650318 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 97-337 |
| Cow position: | chr8:8784240-8784471 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 97-337 |
| Cow position: | chr8:21896674-21896900 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 100-343 |
| Cow position: | chr8:26079787-26079546 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 60, 92 |
| Conread position: | 100-354 |
| Cow position: | chr8:26828986-26828744 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 118, 55 |
| Conread position: | 108-337 |
| Cow position: | chr8:21986470-21986252 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 108-338 |
| Cow position: | chr8:45343893-45344129 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 52, 200 |
| Conread position: | 108-346 |
| Cow position: | chr8:49451100-49451354 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 210 |
| Conread position: | 112-337 |
| Cow position: | chr8:18951147-18950929 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 134 |
| Conread position: | 123-346 |
| Cow position: | chr8:10097527-10097305 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 37, 69 |
| Conread position: | 123-346 |
| Cow position: | chr8:24566339-24566109 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 40, 185 |
| Conread position: | 123-346 |
| Cow position: | chr8:52145816-52145589 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 40, 182 |
| Conread position: | 152-346 |
| Cow position: | chr8:9519058-9519254 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 7, 36 |
Show alignments to all cow chromosomes.