Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8067A15.3.5
        

               Conread position:
               1-151
               

               Cow position:
               chr25:3069002-3068852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               131
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               148-293
               

               Cow position:
               chr25:3068764-3068619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               131
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               348-457
               

               Cow position:
               chr25:3068389-3068280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               455-605
               

               Cow position:
               chr25:3067928-3067778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               135
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               600-835
               

               Cow position:
               chr25:3067698-3067463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1069
               

               Cow position:
               chr25:3067235-3067070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               155
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               1120-1226
               

               Cow position:
               chr25:3066806-3066700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1226-1298
               

               Cow position:
               chr25:3066613-3066541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               73
               

               Alignm identity:
               69
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1297-1455
               

               Cow position:
               chr25:3066459-3066301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               142
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1426-1595
               

               Cow position:
               chr25:3066253-3066082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               32, 0
               
Show alignments to all cow chromosomes.