Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8067D22.3
        

               Conread position:
               4-224
               

               Cow position:
               chr13:56334107-56334327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               167, 149
               

               Conread position:
               5-224
               

               Cow position:
               chr13:39984367-39984588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               90, 81
               

               Conread position:
               5-224
               

               Cow position:
               chr13:56292067-56291845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               63, 90
               

               Conread position:
               9-223
               

               Cow position:
               chr13:39984287-39984503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               9-336
               

               Cow position:
               chr13:39984455-39984778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               85, 77
               

               Conread position:
               10-202
               

               Cow position:
               chr13:39984708-39984900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               10-210
               

               Cow position:
               chr13:39984624-39984824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               84, 76
               

               Conread position:
               11-271
               

               Cow position:
               chr13:56333769-56334027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               209, 0
               
Show alignments to all cow chromosomes.