Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8067D22.3 |
| Conread position: | 3-143 |
| Cow position: | chr23:24626607-24626745 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 3-153 |
| Cow position: | chr23:24522353-24522203 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-201 |
| Cow position: | chr23:24654080-24654278 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 170, 155 |
| Conread position: | 3-203 |
| Cow position: | chr23:24654164-24654364 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 168, 153 |
| Conread position: | 3-210 |
| Cow position: | chr23:24639515-24639722 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 161, 171 |
| Conread position: | 3-211 |
| Cow position: | chr23:24560507-24560299 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-223 |
| Cow position: | chr23:24626439-24626661 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 163, 171 |
| Conread position: | 3-223 |
| Cow position: | chr23:24639767-24639989 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 3-224 |
| Cow position: | chr23:24547283-24547060 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 169, 155 |
| Conread position: | 3-224 |
| Cow position: | chr23:24626355-24626578 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 68, 78 |
| Conread position: | 3-225 |
| Cow position: | chr23:24547199-24546975 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 169, 155 |
| Conread position: | 3-225 |
| Cow position: | chr23:24639683-24639907 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 75 |
| Conread position: | 3-270 |
| Cow position: | chr23:24535998-24535733 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 3-270 |
| Cow position: | chr23:24547031-24546766 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 171, 164 |
| Conread position: | 3-270 |
| Cow position: | chr23:24560423-24560158 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 202, 224 |
| Conread position: | 3-271 |
| Cow position: | chr23:25660450-25660716 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 176, 155 |
| Conread position: | 4-156 |
| Cow position: | chr23:24546862-24546710 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-211 |
| Cow position: | chr23:24626524-24626731 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 168, 149 |
| Conread position: | 5-201 |
| Cow position: | chr23:24522519-24522323 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-210 |
| Cow position: | chr23:24546945-24546740 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-211 |
| Cow position: | chr23:24560337-24560131 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 161, 168 |
| Conread position: | 5-218 |
| Cow position: | chr23:25626748-25626961 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 161, 168 |
| Conread position: | 5-224 |
| Cow position: | chr23:25660284-25660505 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 155, 169 |
| Conread position: | 5-225 |
| Cow position: | chr23:24535744-24535522 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 159, 174 |
| Conread position: | 6-213 |
| Cow position: | chr23:24639434-24639643 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 6-224 |
| Cow position: | chr23:24547112-24546892 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 167, 161 |
| Conread position: | 10-210 |
| Cow position: | chr23:25626585-25626785 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-245 |
| Cow position: | chr23:25626837-25627071 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 134, 144 |
| Conread position: | 10-273 |
| Cow position: | chr23:24560584-24560323 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 11-225 |
| Cow position: | chr23:24522429-24522213 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 155, 163 |
| Conread position: | 11-273 |
| Cow position: | chr23:25626670-25626930 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 11-357 |
| Cow position: | chr23:25626169-25626511 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 60, 72 |
| Conread position: | 18-224 |
| Cow position: | chr23:25626092-25626300 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 137, 155 |
| Conread position: | 20-203 |
| Cow position: | chr23:25723979-25723796 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 140, 168 |
| Conread position: | 20-225 |
| Cow position: | chr23:24560658-24560451 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 39-266 |
| Cow position: | chr23:24536046-24535821 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 188, 0 |
Show alignments to all cow chromosomes.