Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8067D22.3 |
| Conread position: | 2-211 |
| Cow position: | chr24:17013209-17013418 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 3-182 |
| Cow position: | chr24:16986476-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 3-202 |
| Cow position: | chr24:17077795-17077596 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-209 |
| Cow position: | chr24:17070841-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-210 |
| Cow position: | chr24:17036332-17036125 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 163, 170 |
| Conread position: | 3-210 |
| Cow position: | chr24:17036416-17036209 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 163, 171 |
| Conread position: | 3-211 |
| Cow position: | chr24:17035492-17035284 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 169, 155 |
| Conread position: | 3-211 |
| Cow position: | chr24:17035660-17035452 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 163, 171 |
| Conread position: | 3-211 |
| Cow position: | chr24:17036500-17036292 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 163, 171 |
| Conread position: | 3-211 |
| Cow position: | chr24:17070757-17070965 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 88, 92 |
| Conread position: | 3-211 |
| Cow position: | chr24:17078047-17077839 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-224 |
| Cow position: | chr24:17070673-17070896 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 3-225 |
| Cow position: | chr24:17070505-17070729 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 3-248 |
| Cow position: | chr24:17077879-17077636 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 13 |
| Conread position: | 3-270 |
| Cow position: | chr24:17035912-17035647 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 77 |
| Conread position: | 3-272 |
| Cow position: | chr24:17036080-17035813 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 164, 171 |
| Conread position: | 3-273 |
| Cow position: | chr24:17036248-17035980 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 163, 171 |
| Conread position: | 4-156 |
| Cow position: | chr24:17035323-17035171 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 4-356 |
| Cow position: | chr24:17035995-17035647 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 292, 203 |
| Conread position: | 5-224 |
| Cow position: | chr24:17077961-17077740 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 161, 169 |
| Conread position: | 5-269 |
| Cow position: | chr24:17078129-17077867 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 167, 153 |
| Conread position: | 5-272 |
| Cow position: | chr24:17035574-17035309 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 167, 151 |
| Conread position: | 5-273 |
| Cow position: | chr24:17035742-17035476 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 5-336 |
| Cow position: | chr24:17070591-17070918 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 255, 215 |
| Conread position: | 9-210 |
| Cow position: | chr24:17035402-17035201 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 157, 164 |
| Conread position: | 10-211 |
| Cow position: | chr24:17036574-17036376 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 156, 25 |
| Conread position: | 17-243 |
| Cow position: | chr24:17013308-17013533 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 149, 157 |
Show alignments to all cow chromosomes.