Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8067D22.3 |
| Conread position: | 3-142 |
| Cow position: | chr25:34433066-34433205 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-162 |
| Cow position: | chr25:33156923-33156765 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 102 |
| Conread position: | 3-202 |
| Cow position: | chr25:34769406-34769207 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 169, 155 |
| Conread position: | 3-210 |
| Cow position: | chr25:33128016-33128223 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-224 |
| Cow position: | chr25:33157091-33156868 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 3-224 |
| Cow position: | chr25:33157175-33156952 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 83, 77 |
| Conread position: | 3-224 |
| Cow position: | chr25:33157259-33157036 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 165, 175 |
| Conread position: | 3-224 |
| Cow position: | chr25:34769826-34769603 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 3-224 |
| Cow position: | chr25:34769994-34769771 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 4-192 |
| Cow position: | chr25:34769741-34769553 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-211 |
| Cow position: | chr25:33127849-33128056 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 162, 170 |
| Conread position: | 4-211 |
| Cow position: | chr25:34432983-34433190 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 66, 76 |
| Conread position: | 4-224 |
| Cow position: | chr25:23420346-23420568 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 169, 154 |
| Conread position: | 4-224 |
| Cow position: | chr25:33299198-33299420 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 4-270 |
| Cow position: | chr25:34447405-34447669 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 207, 215 |
| Conread position: | 5-209 |
| Cow position: | chr25:33299619-33299823 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-209 |
| Cow position: | chr25:36801759-36801963 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-211 |
| Cow position: | chr25:33127934-33128140 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-224 |
| Cow position: | chr25:33157425-33157204 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 5-224 |
| Cow position: | chr25:33299115-33299336 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 153, 167 |
| Conread position: | 5-224 |
| Cow position: | chr25:33299451-33299672 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 169, 153 |
| Conread position: | 5-254 |
| Cow position: | chr25:34769656-34769409 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 165, 148 |
| Conread position: | 5-266 |
| Cow position: | chr25:33299283-33299542 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 169, 153 |
| Conread position: | 5-272 |
| Cow position: | chr25:33305271-33305009 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 209, 153 |
| Conread position: | 5-334 |
| Cow position: | chr25:23420515-23420840 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 256, 206 |
| Conread position: | 6-205 |
| Cow position: | chr25:23420684-23420883 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-206 |
| Cow position: | chr25:34714083-34714283 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-201 |
| Cow position: | chr25:33298783-33298975 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 180, 175 |
| Conread position: | 9-214 |
| Cow position: | chr25:36800851-36801058 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 180, 176 |
| Conread position: | 9-273 |
| Cow position: | chr25:34770156-34769894 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 48, 32 |
| Conread position: | 9-364 |
| Cow position: | chr25:23420435-23420786 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 280, 208 |
| Conread position: | 10-224 |
| Cow position: | chr25:33299372-33299588 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 11-208 |
| Cow position: | chr25:327060-327258 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 163 |
| Conread position: | 11-210 |
| Cow position: | chr25:33145236-33145435 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-210 |
| Cow position: | chr25:34769566-34769367 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 155, 163 |
| Conread position: | 11-225 |
| Cow position: | chr25:34433578-34433791 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 189, 27 |
| Conread position: | 11-356 |
| Cow position: | chr25:34769902-34769561 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 278, 209 |
| Conread position: | 12-223 |
| Cow position: | chr25:34770069-34769856 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 161, 146 |
| Conread position: | 18-210 |
| Cow position: | chr25:34447503-34447695 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-252 |
| Cow position: | chr25:34769474-34769243 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 19-273 |
| Cow position: | chr25:34447252-34447504 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 241, 198 |
| Conread position: | 20-156 |
| Cow position: | chr25:33298710-33298846 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.