Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8067D22.3 |
| Conread position: | 3-210 |
| Cow position: | chr3:62721775-62721568 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 169, 155 |
| Conread position: | 3-210 |
| Cow position: | chr3:68027138-68027345 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 151, 173 |
| Conread position: | 3-211 |
| Cow position: | chr3:68045815-68046023 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 163, 168 |
| Conread position: | 3-356 |
| Cow position: | chr3:62722195-62721846 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 295, 214 |
| Conread position: | 4-210 |
| Cow position: | chr3:62743223-62743429 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-224 |
| Cow position: | chr3:62742658-62742878 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 203, 82 |
| Conread position: | 4-225 |
| Cow position: | chr3:62742824-62743040 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 57, 78 |
| Conread position: | 4-271 |
| Cow position: | chr3:62721858-62721593 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 162, 170 |
| Conread position: | 5-203 |
| Cow position: | chr3:68027224-68027422 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-211 |
| Cow position: | chr3:62722277-62722071 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-336 |
| Cow position: | chr3:62742242-62742569 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 13, 84 |
| Conread position: | 6-211 |
| Cow position: | chr3:62743141-62743346 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-211 |
| Cow position: | chr3:68027478-68027682 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-223 |
| Cow position: | chr3:62722021-62721805 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 9-225 |
| Cow position: | chr3:68027060-68027278 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 9-254 |
| Cow position: | chr3:68045653-68045896 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 157, 165 |
| Conread position: | 9-336 |
| Cow position: | chr3:68045989-68046312 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 78 |
| Conread position: | 9-359 |
| Cow position: | chr3:68027396-68027742 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 157, 167 |
| Conread position: | 12-273 |
| Cow position: | chr3:62742333-62742592 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 12-334 |
| Cow position: | chr3:68026982-68027297 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 13-208 |
| Cow position: | chr3:62742749-62742945 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 68 |
| Conread position: | 13-210 |
| Cow position: | chr3:62743069-62743261 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 16-211 |
| Cow position: | chr3:62721930-62721735 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 153, 137 |
| Conread position: | 20-189 |
| Cow position: | chr3:68027575-68027744 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 48, 70 |
Show alignments to all cow chromosomes.