Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8067D22.3
        

               Conread position:
               3-210
               

               Cow position:
               chr6:49340450-49340657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               163, 171
               

               Conread position:
               3-223
               

               Cow position:
               chr6:49340954-49341176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               92, 77
               

               Conread position:
               3-224
               

               Cow position:
               chr6:49340534-49340757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               155, 175
               

               Conread position:
               5-210
               

               Cow position:
               chr6:49340368-49340573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-224
               

               Cow position:
               chr6:49341208-49341429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               90, 75
               

               Conread position:
               9-224
               

               Cow position:
               chr6:49341044-49341261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               85, 79
               

               Conread position:
               10-271
               

               Cow position:
               chr6:49341129-49341388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               197, 210
               

               Conread position:
               11-224
               

               Cow position:
               chr6:49340794-49341009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               196, 0
               

               Conread position:
               19-164
               

               Cow position:
               chr6:49340718-49340863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-223
               

               Cow position:
               chr6:49340635-49340840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               136, 158
               
Show alignments to all cow chromosomes.