Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8067D22.3 |
| Conread position: | 2-339 |
| Cow position: | chr8:48407583-48407252 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 166, 13 |
| Conread position: | 3-193 |
| Cow position: | chr8:48406658-48406470 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 7 |
| Conread position: | 3-210 |
| Cow position: | chr8:48406996-48406789 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 77 |
| Conread position: | 3-266 |
| Cow position: | chr8:55581204-55581465 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 3-272 |
| Cow position: | chr8:48406576-48406309 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 3-273 |
| Cow position: | chr8:48407416-48407148 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 204, 224 |
| Conread position: | 3-336 |
| Cow position: | chr8:55580952-55581281 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 288, 217 |
| Conread position: | 4-203 |
| Cow position: | chr8:55581289-55581488 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 169, 154 |
| Conread position: | 4-261 |
| Cow position: | chr8:6958033-6957777 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 247, 203 |
| Conread position: | 5-203 |
| Cow position: | chr8:45201738-45201936 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-206 |
| Cow position: | chr8:46817101-46817302 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-208 |
| Cow position: | chr8:55581458-55581661 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-210 |
| Cow position: | chr8:46816009-46816214 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 82 |
| Conread position: | 5-210 |
| Cow position: | chr8:46816261-46816466 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 165, 160 |
| Conread position: | 5-210 |
| Cow position: | chr8:46816933-46817138 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 63, 79 |
| Conread position: | 5-211 |
| Cow position: | chr8:45201402-45201608 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-211 |
| Cow position: | chr8:46816429-46816635 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-211 |
| Cow position: | chr8:46816765-46816971 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 96 |
| Conread position: | 5-211 |
| Cow position: | chr8:55581122-55581328 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 161, 169 |
| Conread position: | 5-212 |
| Cow position: | chr8:46817185-46817392 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 71, 91 |
| Conread position: | 5-224 |
| Cow position: | chr8:45201570-45201791 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 167, 153 |
| Conread position: | 5-225 |
| Cow position: | chr8:46816681-46816903 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 177, 183 |
| Conread position: | 5-268 |
| Cow position: | chr8:45201318-45201579 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 5-268 |
| Cow position: | chr8:45201654-45201915 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 202, 224 |
| Conread position: | 5-273 |
| Cow position: | chr8:46816177-46816443 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 164, 153 |
| Conread position: | 5-273 |
| Cow position: | chr8:48407246-48406980 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 85 |
| Conread position: | 5-336 |
| Cow position: | chr8:45200982-45201309 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 6-201 |
| Cow position: | chr8:48407077-48406882 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 167, 152 |
| Conread position: | 6-271 |
| Cow position: | chr8:46816346-46816609 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 9-225 |
| Cow position: | chr8:55581042-55581260 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 157, 165 |
| Conread position: | 10-211 |
| Cow position: | chr8:48407325-48407124 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-268 |
| Cow position: | chr8:48407156-48406901 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 65, 76 |
| Conread position: | 19-201 |
| Cow position: | chr8:45201164-45201346 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 64, 84 |
| Conread position: | 19-210 |
| Cow position: | chr8:46816527-46816718 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-210 |
| Cow position: | chr8:46816863-46817054 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-224 |
| Cow position: | chr8:45201248-45201455 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 145, 152 |
| Conread position: | 19-273 |
| Cow position: | chr8:45201500-45201752 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 20-164 |
| Cow position: | chr8:46817032-46817176 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-210 |
| Cow position: | chr8:46816612-46816802 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 152, 138 |
Show alignments to all cow chromosomes.