Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8067D22.3 |
| Conread position: | 4-211 |
| Cow position: | chrX:25325372-25325165 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 5-210 |
| Cow position: | chrX:25324699-25324494 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 64, 79 |
| Conread position: | 5-210 |
| Cow position: | chrX:25324867-25324662 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-210 |
| Cow position: | chrX:25325119-25324914 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 78 |
| Conread position: | 5-210 |
| Cow position: | chrX:25325539-25325334 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 72, 81 |
| Conread position: | 5-211 |
| Cow position: | chrX:25324951-25324745 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-211 |
| Cow position: | chrX:29045044-29044838 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-213 |
| Cow position: | chrX:29045611-29045403 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-224 |
| Cow position: | chrX:25309770-25309991 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 65, 96 |
| Conread position: | 5-225 |
| Cow position: | chrX:25309854-25310076 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 167, 153 |
| Conread position: | 5-225 |
| Cow position: | chrX:25309938-25310160 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 78 |
| Conread position: | 5-336 |
| Cow position: | chrX:29045212-29044885 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 79, 98 |
| Conread position: | 5-338 |
| Cow position: | chrX:25325455-25325126 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 78 |
| Conread position: | 6-223 |
| Cow position: | chrX:25325034-25324815 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 6-225 |
| Cow position: | chrX:29045694-29045473 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 7-353 |
| Cow position: | chrX:25310192-25310534 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 166, 151 |
| Conread position: | 10-144 |
| Cow position: | chrX:25310447-25310581 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-210 |
| Cow position: | chrX:29044870-29044671 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 163, 147 |
| Conread position: | 11-273 |
| Cow position: | chrX:29044954-29044694 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 161, 147 |
| Conread position: | 11-356 |
| Cow position: | chrX:25310112-25310453 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 58, 76 |
| Conread position: | 11-362 |
| Cow position: | chrX:29045773-29045426 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 278, 206 |
| Conread position: | 14-273 |
| Cow position: | chrX:25325194-25324937 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 19-210 |
| Cow position: | chrX:25324769-25324578 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 153, 139 |
| Conread position: | 19-223 |
| Cow position: | chrX:25310372-25310578 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 153, 134 |
| Conread position: | 19-273 |
| Cow position: | chrX:25324517-25324265 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 20-211 |
| Cow position: | chrX:25324600-25324409 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 20-225 |
| Cow position: | chrX:25310037-25310244 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 20-336 |
| Cow position: | chrX:29045113-29044801 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 150, 138 |
Show alignments to all cow chromosomes.