Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8068J22.3 |
| Conread position: | 159-379 |
| Cow position: | chr1:65156095-65155874 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 112, 196 |
| Conread position: | 180-431 |
| Cow position: | chr1:99069451-99069187 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 11, 182 |
| Conread position: | 182-623 |
| Cow position: | chr1:57103134-57103569 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 245 |
| Conread position: | 182-630 |
| Cow position: | chr1:12585140-12585599 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 184-631 |
| Cow position: | chr1:8175999-8176428 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 136 |
| Conread position: | 185-488 |
| Cow position: | chr1:23544711-23544398 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 82, 35 |
| Conread position: | 186-375 |
| Cow position: | chr1:93891596-93891398 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 113, 31 |
| Conread position: | 186-407 |
| Cow position: | chr1:30365173-30365394 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 92 |
| Conread position: | 187-430 |
| Cow position: | chr1:88278417-88278154 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 86, 38 |
| Conread position: | 188-623 |
| Cow position: | chr1:64395166-64394727 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 152 |
| Conread position: | 189-599 |
| Cow position: | chr1:53621250-53620858 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 296 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 34, 157 |
| Conread position: | 189-621 |
| Cow position: | chr1:29256270-29256678 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 65 |
| Conread position: | 190-376 |
| Cow position: | chr1:38054879-38055077 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 191-401 |
| Cow position: | chr1:81000860-81000644 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 79, 169 |
| Conread position: | 191-424 |
| Cow position: | chr1:62136478-62136231 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 80, 182 |
| Conread position: | 191-487 |
| Cow position: | chr1:68372120-68371827 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 110, 168 |
| Conread position: | 191-529 |
| Cow position: | chr1:5007197-5006859 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 82, 134 |
| Conread position: | 192-407 |
| Cow position: | chr1:52141959-52141729 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 79, 65 |
| Conread position: | 192-412 |
| Cow position: | chr1:97645885-97645665 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 75, 113 |
| Conread position: | 192-431 |
| Cow position: | chr1:73040111-73039858 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 79, 233 |
| Conread position: | 192-431 |
| Cow position: | chr1:96627205-96626947 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 192-557 |
| Cow position: | chr1:77591827-77591469 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 75, 150 |
| Conread position: | 192-588 |
| Cow position: | chr1:15192365-15191957 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 59 |
| Conread position: | 192-616 |
| Cow position: | chr1:81218487-81218071 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 130 |
| Conread position: | 192-619 |
| Cow position: | chr1:42542799-42542364 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 140 |
| Conread position: | 192-619 |
| Cow position: | chr1:63572138-63572544 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 300 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 79, 67 |
| Conread position: | 192-633 |
| Cow position: | chr1:8199195-8198722 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 330 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 81, 117 |
| Conread position: | 193-412 |
| Cow position: | chr1:88636682-88636460 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 77, 53 |
| Conread position: | 193-416 |
| Cow position: | chr1:64631967-64632197 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 79, 167 |
| Conread position: | 193-617 |
| Cow position: | chr1:42948659-42948227 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 39 |
| Conread position: | 193-619 |
| Cow position: | chr1:35706017-35706472 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 194-424 |
| Cow position: | chr1:28867620-28867872 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 72, 241 |
| Conread position: | 194-430 |
| Cow position: | chr1:67999529-67999777 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 75, 205 |
| Conread position: | 194-431 |
| Cow position: | chr1:93834484-93834232 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 73, 221 |
| Conread position: | 194-619 |
| Cow position: | chr1:95653167-95653597 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 306 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 77, 62 |
| Conread position: | 195-397 |
| Cow position: | chr1:39005566-39005773 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 72, 182 |
| Conread position: | 195-403 |
| Cow position: | chr1:99217758-99217979 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 195-431 |
| Cow position: | chr1:77980694-77980459 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 108 |
| Conread position: | 195-431 |
| Cow position: | chr1:85690841-85691090 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 195-619 |
| Cow position: | chr1:25858772-25859195 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 275 |
| Conread position: | 195-624 |
| Cow position: | chr1:65774795-65775219 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 23 |
| Conread position: | 202-432 |
| Cow position: | chr1:93813981-93813739 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 202-619 |
| Cow position: | chr1:20957726-20957306 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 191 |
| Conread position: | 202-683 |
| Cow position: | chr1:28821696-28821198 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 206 |
| Conread position: | 203-636 |
| Cow position: | chr1:82904291-82903849 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 236 |
| Conread position: | 207-618 |
| Cow position: | chr1:10993163-10992769 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 207-620 |
| Cow position: | chr1:20075184-20075598 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 214 |
| Conread position: | 208-379 |
| Cow position: | chr1:57542823-57542652 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 91, 19 |
| Conread position: | 208-407 |
| Cow position: | chr1:101063858-101064059 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 50 |
| Conread position: | 208-431 |
| Cow position: | chr1:45071760-45071989 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 28 |
| Conread position: | 208-433 |
| Cow position: | chr1:43114287-43114053 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 61, 12 |
| Conread position: | 210-619 |
| Cow position: | chr1:5238325-5238728 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 118 |
| Conread position: | 212-621 |
| Cow position: | chr1:84278468-84278044 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 213-376 |
| Cow position: | chr1:79078962-79079137 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 229-618 |
| Cow position: | chr1:15535099-15535484 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 13 |
| Conread position: | 229-618 |
| Cow position: | chr1:17086959-17086563 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 131 |
| Conread position: | 230-486 |
| Cow position: | chr1:11606425-11606157 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 71, 50 |
| Conread position: | 240-564 |
| Cow position: | chr1:61550781-61550443 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 29, 204 |
| Conread position: | 248-431 |
| Cow position: | chr1:63050477-63050674 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 248-503 |
| Cow position: | chr1:8220433-8220698 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 246 |
| Conread position: | 255-639 |
| Cow position: | chr1:28040986-28041379 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 148 |
| Conread position: | 255-689 |
| Cow position: | chr1:21015038-21015457 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 110 |
| Conread position: | 298-619 |
| Cow position: | chr1:93227274-93227612 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 35, 97 |
| Conread position: | 298-692 |
| Cow position: | chr1:52100153-52100547 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 67 |
| Conread position: | 301-621 |
| Cow position: | chr1:15527176-15526845 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 306 |
| Conread position: | 308-618 |
| Cow position: | chr1:89928640-89928347 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 310-620 |
| Cow position: | chr1:5263633-5263936 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 313-623 |
| Cow position: | chr1:64392690-64393005 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 86 |
| Conread position: | 355-619 |
| Cow position: | chr1:94571185-94570925 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 26, 97 |
| Conread position: | 363-617 |
| Cow position: | chr1:40437640-40437885 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 20, 136 |
| Conread position: | 370-617 |
| Cow position: | chr1:65155167-65154921 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 386-697 |
| Cow position: | chr1:73254665-73254360 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 226 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 104, 42 |
| Conread position: | 395-618 |
| Cow position: | chr1:62134471-62134252 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 93, 33 |
| Conread position: | 415-633 |
| Cow position: | chr1:13702636-13702849 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 422-623 |
| Cow position: | chr1:6534989-6534789 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 166 |
| Conread position: | 424-619 |
| Cow position: | chr1:75265590-75265785 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 8, 21 |
| Conread position: | 424-619 |
| Cow position: | chr1:88631682-88631481 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 430-585 |
| Cow position: | chr1:77977892-77977735 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 56, 72 |
| Conread position: | 430-587 |
| Cow position: | chr1:48638212-48638054 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 89 |
| Conread position: | 430-613 |
| Cow position: | chr1:100285269-100285446 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 430-618 |
| Cow position: | chr1:29176387-29176197 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 430-618 |
| Cow position: | chr1:84002659-84002473 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 430-619 |
| Cow position: | chr1:19140019-19139833 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 430-619 |
| Cow position: | chr1:32665333-32665524 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 156 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 430-619 |
| Cow position: | chr1:37198034-37198225 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 58, 106 |
| Conread position: | 430-619 |
| Cow position: | chr1:68001970-68002160 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 57, 110 |
| Conread position: | 430-620 |
| Cow position: | chr1:9454421-9454228 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 430-620 |
| Cow position: | chr1:44962202-44962393 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 60, 165 |
| Conread position: | 430-621 |
| Cow position: | chr1:52022577-52022769 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 48, 68 |
| Conread position: | 430-622 |
| Cow position: | chr1:12972922-12972732 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 57, 13 |
| Conread position: | 430-622 |
| Cow position: | chr1:74532892-74532699 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 430-624 |
| Cow position: | chr1:25255796-25255598 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 60, 90 |
| Conread position: | 433-612 |
| Cow position: | chr1:85695446-85695625 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 49, 151 |
| Conread position: | 434-619 |
| Cow position: | chr1:99224874-99224693 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 8, 48 |
| Conread position: | 434-622 |
| Cow position: | chr1:96624375-96624189 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 148, 30 |
| Conread position: | 434-651 |
| Cow position: | chr1:99067546-99067329 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 136, 38 |
| Conread position: | 434-688 |
| Cow position: | chr1:39005776-39006024 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 128 |
| Conread position: | 436-623 |
| Cow position: | chr1:17071073-17071249 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 437-617 |
| Cow position: | chr1:77188526-77188709 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 437-623 |
| Cow position: | chr1:4822508-4822697 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 437-682 |
| Cow position: | chr1:44259355-44259601 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 94 |
| Conread position: | 438-639 |
| Cow position: | chr1:67321677-67321490 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 124 |
| Conread position: | 440-619 |
| Cow position: | chr1:8221101-8221281 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 38, 125 |
| Conread position: | 459-618 |
| Cow position: | chr1:97740109-97739952 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 464-660 |
| Cow position: | chr1:57590961-57591169 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 465-624 |
| Cow position: | chr1:54055157-54055312 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 468-618 |
| Cow position: | chr1:68371357-68371216 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 468-619 |
| Cow position: | chr1:26413681-26413536 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 79, 25 |
| Conread position: | 468-619 |
| Cow position: | chr1:34285238-34285090 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 91, 26 |
| Conread position: | 475-623 |
| Cow position: | chr1:16875968-16875818 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 479-619 |
| Cow position: | chr1:6818849-6818984 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 483-620 |
| Cow position: | chr1:93813326-93813192 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 488-619 |
| Cow position: | chr1:68244483-68244355 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 490-616 |
| Cow position: | chr1:91819684-91819804 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 493-623 |
| Cow position: | chr1:51608903-51609031 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 496-618 |
| Cow position: | chr1:49759952-49759830 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 496-679 |
| Cow position: | chr1:31323926-31323741 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 96, 85 |
| Conread position: | 499-619 |
| Cow position: | chr1:88276186-88276065 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 8 |
| Conread position: | 499-623 |
| Cow position: | chr1:97645635-97645512 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 84, 75 |
Show alignments to all cow chromosomes.