Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8068J22.3
        

               Conread position:
               165-636
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 25
               

               Conread position:
               178-618
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               183-429
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               20, 68
               

               Conread position:
               183-692
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 242
               

               Conread position:
               184-335
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               184-431
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               83, 210
               

               Conread position:
               184-633
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 33
               

               Conread position:
               184-728
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 127
               

               Conread position:
               186-327
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               83, 99
               

               Conread position:
               187-623
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               84, 9
               

               Conread position:
               187-633
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 235
               

               Conread position:
               188-485
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               189-431
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               82, 222
               

               Conread position:
               190-338
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               190-431
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               191-431
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               112, 27
               

               Conread position:
               191-573
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 209
               

               Conread position:
               191-619
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 191
               

               Conread position:
               191-620
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 34
               

               Conread position:
               192-360
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 53
               

               Conread position:
               192-390
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               79, 113
               

               Conread position:
               192-431
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               192-618
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 148
               

               Conread position:
               192-619
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 44
               

               Conread position:
               192-619
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 425
               

               Conread position:
               192-619
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 91
               

               Conread position:
               192-623
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 215
               

               Conread position:
               192-636
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               323
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               79, 206
               

               Conread position:
               192-692
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 166
               

               Conread position:
               193-392
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               80, 158
               

               Conread position:
               193-416
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               72, 168
               

               Conread position:
               193-542
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               259
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               74, 171
               

               Conread position:
               193-613
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 19
               

               Conread position:
               193-619
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 175
               

               Conread position:
               194-328
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               194-431
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               77, 83
               

               Conread position:
               194-624
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 209
               

               Conread position:
               195-619
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 164
               

               Conread position:
               196-620
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 166
               

               Conread position:
               205-407
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 128
               

               Conread position:
               213-551
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               59, 22
               

               Conread position:
               214-431
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               55, 91
               

               Conread position:
               218-616
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 227
               

               Conread position:
               218-617
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 164
               

               Conread position:
               218-619
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               225-431
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               44, 49
               

               Conread position:
               234-430
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               239-619
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 165
               

               Conread position:
               254-589
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               15, 69
               

               Conread position:
               255-430
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               256-433
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               256-619
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               265
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               272-619
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 37
               

               Conread position:
               285-431
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               298-431
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               314-623
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               317-617
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               368-619
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 82
               

               Conread position:
               419-619
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               145, 59
               

               Conread position:
               420-623
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               421-619
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               429-618
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               116, 52
               

               Conread position:
               430-618
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               430-619
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               130, 48
               

               Conread position:
               430-619
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               430-619
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               152
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               430-619
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               60, 113
               

               Conread position:
               430-624
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               160
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               48, 94
               

               Conread position:
               430-624
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               431-618
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               21, 145
               

               Conread position:
               434-614
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               434-618
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               434-619
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               152
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               434-693
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 212
               

               Conread position:
               436-619
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               49, 134
               

               Conread position:
               437-618
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 97
               

               Conread position:
               440-565
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               440-619
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               442-692
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               447-619
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               43, 84
               

               Conread position:
               450-680
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               40, 168
               

               Conread position:
               450-690
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               28, 84
               

               Conread position:
               452-695
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               117, 13
               

               Conread position:
               457-619
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               457-620
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               55, 31
               

               Conread position:
               457-624
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               461-633
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               153, 67
               

               Conread position:
               466-623
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               483-618
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               493-617
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               493-622
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               493-623
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               493-623
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               499-613
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.