Cow genome map

Conread name: Ss1.1-Pig4-TMW8068J22.3

Conread position: 159-431
Cow position:
Alignm length: 279
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 12

Conread position: 166-431
Cow position:
Alignm length: 270
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 196, 11

Conread position: 172-338
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 20

Conread position: 179-619
Cow position:
Alignm length: 464
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 262

Conread position: 183-431
Cow position:
Alignm length: 263
Alignm identity: 191
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 7

Conread position: 185-620
Cow position:
Alignm length: 448
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 254

Conread position: 188-423
Cow position:
Alignm length: 241
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 141

Conread position: 189-350
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 189-618
Cow position:
Alignm length: 441
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 190-611
Cow position:
Alignm length: 433
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 99

Conread position: 190-617
Cow position:
Alignm length: 438
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 136

Conread position: 190-689
Cow position:
Alignm length: 508
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 91

Conread position: 191-323
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 191-407
Cow position:
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 135

Conread position: 191-431
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 76, 135

Conread position: 192-333
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 192-338
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 192-369
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 165

Conread position: 192-380
Cow position:
Alignm length: 200
Alignm identity: 153
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 75, 140

Conread position: 192-390
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 192-400
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 70, 178

Conread position: 192-431
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 84, 23

Conread position: 192-431
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 44

Conread position: 192-431
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 96

Conread position: 192-568
Cow position:
Alignm length: 392
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 185

Conread position: 192-604
Cow position:
Alignm length: 426
Alignm identity: 291
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 124

Conread position: 192-608
Cow position:
Alignm length: 439
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 25

Conread position: 192-617
Cow position:
Alignm length: 435
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 90

Conread position: 192-618
Cow position:
Alignm length: 437
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 90

Conread position: 192-622
Cow position:
Alignm length: 444
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 32

Conread position: 192-631
Cow position:
Alignm length: 457
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 216

Conread position: 192-631
Cow position:
Alignm length: 449
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 16

Conread position: 192-638
Cow position:
Alignm length: 453
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 10

Conread position: 193-372
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 193-376
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 193-431
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 22

Conread position: 193-619
Cow position:
Alignm length: 436
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 9

Conread position: 194-431
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 105, 165

Conread position: 194-568
Cow position:
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 239

Conread position: 195-431
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 78, 0

Conread position: 195-618
Cow position:
Alignm length: 452
Alignm identity: 308
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 104, 69

Conread position: 195-619
Cow position:
Alignm length: 437
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 55

Conread position: 195-677
Cow position:
Alignm length: 525
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 20

Conread position: 202-379
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 65, 157

Conread position: 202-518
Cow position:
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 117

Conread position: 203-424
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 64, 44

Conread position: 204-618
Cow position:
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 208

Conread position: 208-581
Cow position:
Alignm length: 389
Alignm identity: 268
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 104

Conread position: 208-620
Cow position:
Alignm length: 434
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 235

Conread position: 212-442
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 217-619
Cow position:
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 112

Conread position: 219-611
Cow position:
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 88

Conread position: 225-618
Cow position:
Alignm length: 425
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 334

Conread position: 226-623
Cow position:
Alignm length: 417
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 24

Conread position: 227-619
Cow position:
Alignm length: 414
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 104

Conread position: 230-425
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 251-431
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 255-431
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 74

Conread position: 269-570
Cow position:
Alignm length: 310
Alignm identity: 218
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 26, 45

Conread position: 297-619
Cow position:
Alignm length: 330
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 75

Conread position: 310-618
Cow position:
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 17

Conread position: 314-619
Cow position:
Alignm length: 315
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 84

Conread position: 316-619
Cow position:
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 122

Conread position: 316-633
Cow position:
Alignm length: 329
Alignm identity: 238
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 20, 113

Conread position: 337-631
Cow position:
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 102

Conread position: 347-581
Cow position:
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 14

Conread position: 362-619
Cow position:
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 59

Conread position: 367-618
Cow position:
Alignm length: 262
Alignm identity: 197
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 94

Conread position: 370-626
Cow position:
Alignm length: 263
Alignm identity: 190
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 84

Conread position: 377-619
Cow position:
Alignm length: 244
Alignm identity: 185
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 58, 80

Conread position: 379-623
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 108, 5

Conread position: 382-572
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 398-701
Cow position:
Alignm length: 305
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 37, 11

Conread position: 415-575
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 12

Conread position: 421-620
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 118

Conread position: 428-600
Cow position:
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 0

Conread position: 430-588
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 41

Conread position: 430-617
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 58, 101

Conread position: 430-619
Cow position:
Alignm length: 193
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 69

Conread position: 430-619
Cow position:
Alignm length: 193
Alignm identity: 155
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 60, 44

Conread position: 430-619
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 145, 0

Conread position: 430-619
Cow position:
Alignm length: 190
Alignm identity: 152
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 58, 0

Conread position: 430-619
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 58, 19

Conread position: 430-635
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 139, 29

Conread position: 430-638
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 431-612
Cow position:
Alignm length: 190
Alignm identity: 146
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 433-619
Cow position:
Alignm length: 187
Alignm identity: 147
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 434-556
Cow position:
Alignm length: 126
Alignm identity: 108
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 434-617
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 95

Conread position: 434-619
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 41

Conread position: 434-623
Cow position:
Alignm length: 193
Alignm identity: 155
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 49, 97

Conread position: 434-642
Cow position:
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 106

Conread position: 435-619
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 89

Conread position: 436-618
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 66

Conread position: 436-619
Cow position:
Alignm length: 188
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 79

Conread position: 436-622
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 55, 0

Conread position: 437-580
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 141

Conread position: 437-583
Cow position:
Alignm length: 150
Alignm identity: 121
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 438-641
Cow position:
Alignm length: 205
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 438-675
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 188, 155

Conread position: 444-623
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 36, 122

Conread position: 449-622
Cow position:
Alignm length: 179
Alignm identity: 144
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 38, 10

Conread position: 450-565
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 450-618
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 453-619
Cow position:
Alignm length: 172
Alignm identity: 139
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 453-619
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 86

Conread position: 454-623
Cow position:
Alignm length: 172
Alignm identity: 140
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 32, 0

Conread position: 457-618
Cow position:
Alignm length: 165
Alignm identity: 131
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 457-630
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 13

Conread position: 460-692
Cow position:
Alignm length: 233
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 461-648
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 70

Conread position: 463-628
Cow position:
Alignm length: 169
Alignm identity: 133
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 488-623
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 51

Conread position: 490-613
Cow position:
Alignm length: 124
Alignm identity: 105
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 492-619
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 496-619
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 499-604
Cow position:
Alignm length: 107
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 78

Conread position: 499-618
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 500-617
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 502-618
Cow position:
Alignm length: 117
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 517-691
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 74

Show alignments to all cow chromosomes.