Cow genome map
Conread name: | Ss1.1-Pig4-TMW8068J22.3 |
Conread position: | 183-381 |
Cow position: | chr13:48408095-48407895 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 140 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 183-619 |
Cow position: | chr13:35694581-35694144 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 75 |
Conread position: | 184-617 |
Cow position: | chr13:29725978-29726393 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 302 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 9, 137 |
Conread position: | 184-619 |
Cow position: | chr13:8735310-8734866 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 238 |
Conread position: | 185-630 |
Cow position: | chr13:42598911-42599367 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 326 |
Conread position: | 185-689 |
Cow position: | chr13:15371663-15372158 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 174 |
Conread position: | 188-610 |
Cow position: | chr13:55817607-55818018 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 302 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 83, 227 |
Conread position: | 189-405 |
Cow position: | chr13:17112209-17112438 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 164 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 82, 120 |
Conread position: | 190-381 |
Cow position: | chr13:42341809-42341608 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 149 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 190-431 |
Cow position: | chr13:505195-505455 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 191 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 190-546 |
Cow position: | chr13:45279260-45278898 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 255 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 29, 141 |
Conread position: | 190-565 |
Cow position: | chr13:2885607-2885236 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 104 |
Conread position: | 191-430 |
Cow position: | chr13:42370697-42370460 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 182 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 82, 14 |
Conread position: | 191-555 |
Cow position: | chr13:6640069-6639685 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 255 |
Conread position: | 191-618 |
Cow position: | chr13:55459146-55458746 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 61 |
Conread position: | 191-623 |
Cow position: | chr13:45230083-45230524 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 34 |
Conread position: | 192-381 |
Cow position: | chr13:47295379-47295575 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 152 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 102, 166 |
Conread position: | 192-399 |
Cow position: | chr13:31841969-31841757 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 164 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 88, 72 |
Conread position: | 192-407 |
Cow position: | chr13:20296994-20296769 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 171 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 75, 19 |
Conread position: | 192-431 |
Cow position: | chr13:1165445-1165695 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 188 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 77, 206 |
Conread position: | 192-431 |
Cow position: | chr13:50531740-50531996 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 181 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 79, 212 |
Conread position: | 192-535 |
Cow position: | chr13:26484588-26484948 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 192-654 |
Cow position: | chr13:34082211-34082650 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 201 |
Conread position: | 192-691 |
Cow position: | chr13:61020975-61021448 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 330 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 34, 120 |
Conread position: | 193-619 |
Cow position: | chr13:20091950-20092374 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 15 |
Conread position: | 194-619 |
Cow position: | chr13:39745824-39745400 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 14 |
Conread position: | 195-358 |
Cow position: | chr13:16653387-16653551 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 120 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 79, 159 |
Conread position: | 195-395 |
Cow position: | chr13:48964138-48964348 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 166 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 69, 112 |
Conread position: | 199-431 |
Cow position: | chr13:49623779-49624010 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 174 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 97, 9 |
Conread position: | 203-407 |
Cow position: | chr13:26210462-26210681 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 165 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 205-431 |
Cow position: | chr13:42780290-42780523 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 174 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 128, 95 |
Conread position: | 208-618 |
Cow position: | chr13:55778353-55778757 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 125 |
Conread position: | 208-619 |
Cow position: | chr13:25921262-25921674 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 86 |
Conread position: | 209-433 |
Cow position: | chr13:56916357-56916123 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 184 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 28, 148 |
Conread position: | 210-616 |
Cow position: | chr13:11263421-11263011 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 168 |
Conread position: | 223-407 |
Cow position: | chr13:44586142-44586332 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 133 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 225-460 |
Cow position: | chr13:16136501-16136253 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 182 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 228-618 |
Cow position: | chr13:21292245-21292633 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 54 |
Conread position: | 242-621 |
Cow position: | chr13:12507853-12508229 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 17 |
Conread position: | 256-629 |
Cow position: | chr13:5909466-5909089 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 52 |
Conread position: | 274-541 |
Cow position: | chr13:32788453-32788714 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 192 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 25, 53 |
Conread position: | 290-618 |
Cow position: | chr13:55599471-55599149 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 243 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 56, 34 |
Conread position: | 298-549 |
Cow position: | chr13:57415915-57416166 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 193 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 85, 39 |
Conread position: | 352-627 |
Cow position: | chr13:21279501-21279225 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 47 |
Conread position: | 353-619 |
Cow position: | chr13:41327888-41327625 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 199 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 10, 85 |
Conread position: | 362-599 |
Cow position: | chr13:14999508-14999275 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 173 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 21, 71 |
Conread position: | 362-619 |
Cow position: | chr13:6187286-6187549 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 141 |
Conread position: | 368-619 |
Cow position: | chr13:20349356-20349108 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 188 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 12, 49 |
Conread position: | 370-618 |
Cow position: | chr13:9392221-9391985 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 196 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 13, 58 |
Conread position: | 370-619 |
Cow position: | chr13:20330986-20330742 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 193 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 13, 54 |
Conread position: | 384-636 |
Cow position: | chr13:23798698-23798952 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 244 |
Conread position: | 385-637 |
Cow position: | chr13:40508308-40508563 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 156 |
Conread position: | 385-693 |
Cow position: | chr13:15656953-15656645 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 227 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 100, 21 |
Conread position: | 386-623 |
Cow position: | chr13:15933954-15933716 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 185 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 35, 24 |
Conread position: | 424-631 |
Cow position: | chr13:20855759-20855972 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 164 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 39, 74 |
Conread position: | 430-574 |
Cow position: | chr13:47328922-47329068 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 119 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 56, 91 |
Conread position: | 430-581 |
Cow position: | chr13:17510569-17510415 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 123 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 430-619 |
Cow position: | chr13:47571794-47571602 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 159 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 60, 69 |
Conread position: | 430-619 |
Cow position: | chr13:49626541-49626727 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 139 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 33, 46 |
Conread position: | 430-623 |
Cow position: | chr13:51746899-51747095 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 160 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 430-690 |
Cow position: | chr13:32201923-32201663 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 197 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 60, 197 |
Conread position: | 431-616 |
Cow position: | chr13:11703548-11703732 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 142 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 46, 40 |
Conread position: | 431-714 |
Cow position: | chr13:14069253-14069539 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 195 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 58, 17 |
Conread position: | 434-623 |
Cow position: | chr13:56297676-56297864 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 151 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 434-657 |
Cow position: | chr13:42782363-42782591 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 170 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 15, 155 |
Conread position: | 434-688 |
Cow position: | chr13:27382548-27382802 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 200 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 44, 153 |
Conread position: | 436-617 |
Cow position: | chr13:25978496-25978681 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 142 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 436-619 |
Cow position: | chr13:16655532-16655709 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 137 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 51, 7 |
Conread position: | 436-690 |
Cow position: | chr13:44090623-44090382 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 185 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 52, 14 |
Conread position: | 443-618 |
Cow position: | chr13:31806670-31806842 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 142 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 45, 97 |
Conread position: | 447-623 |
Cow position: | chr13:15788556-15788381 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 134 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 116, 34 |
Conread position: | 448-618 |
Cow position: | chr13:42368445-42368273 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 140 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 42, 145 |
Conread position: | 449-619 |
Cow position: | chr13:56901753-56901923 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 136 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 451-619 |
Cow position: | chr13:16135972-16135799 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 137 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 455-616 |
Cow position: | chr13:60903268-60903433 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 134 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 26, 140 |
Conread position: | 457-620 |
Cow position: | chr13:16102591-16102428 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 129 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 464-677 |
Cow position: | chr13:4184501-4184709 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 159 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 11, 6 |
Conread position: | 465-624 |
Cow position: | chr13:16927005-16927167 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 120 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 489-618 |
Cow position: | chr13:44385512-44385639 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 102 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 491-623 |
Cow position: | chr13:59954881-59954747 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 105 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 492-692 |
Cow position: | chr13:505468-505670 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 150 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 493-621 |
Cow position: | chr13:4074293-4074420 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 493-623 |
Cow position: | chr13:14892483-14892356 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 114, 94 |
Conread position: | 493-633 |
Cow position: | chr13:41686932-41687070 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 121 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 493-650 |
Cow position: | chr13:42341325-42341168 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 120 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 74, 99 |
Conread position: | 512-627 |
Cow position: | chr13:32292665-32292550 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 92 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 547-633 |
Cow position: | chr13:58271120-58271034 (view UCSC Genome Browser custom track) |
Alignm length: | 87 |
Alignm identity: | 81 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.