Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8068J22.3
        

               Conread position:
               183-381
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               183-619
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 75
               

               Conread position:
               184-617
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               302
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               9, 137
               

               Conread position:
               184-619
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 238
               

               Conread position:
               185-630
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 326
               

               Conread position:
               185-689
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 174
               

               Conread position:
               188-610
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               302
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               83, 227
               

               Conread position:
               189-405
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               82, 120
               

               Conread position:
               190-381
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               190-431
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               190-546
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               29, 141
               

               Conread position:
               190-565
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               191-430
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               82, 14
               

               Conread position:
               191-555
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 255
               

               Conread position:
               191-618
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 61
               

               Conread position:
               191-623
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 34
               

               Conread position:
               192-381
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               102, 166
               

               Conread position:
               192-399
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               88, 72
               

               Conread position:
               192-407
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               75, 19
               

               Conread position:
               192-431
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               77, 206
               

               Conread position:
               192-431
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               79, 212
               

               Conread position:
               192-535
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               192-654
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 201
               

               Conread position:
               192-691
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               330
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               34, 120
               

               Conread position:
               193-619
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 15
               

               Conread position:
               194-619
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 14
               

               Conread position:
               195-358
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               79, 159
               

               Conread position:
               195-395
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               69, 112
               

               Conread position:
               199-431
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               97, 9
               

               Conread position:
               203-407
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               205-431
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               128, 95
               

               Conread position:
               208-618
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 125
               

               Conread position:
               208-619
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 86
               

               Conread position:
               209-433
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               28, 148
               

               Conread position:
               210-616
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 168
               

               Conread position:
               223-407
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               225-460
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               228-618
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 54
               

               Conread position:
               242-621
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 17
               

               Conread position:
               256-629
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 52
               

               Conread position:
               274-541
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 53
               

               Conread position:
               290-618
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               243
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               56, 34
               

               Conread position:
               298-549
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               85, 39
               

               Conread position:
               352-627
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               353-619
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               10, 85
               

               Conread position:
               362-599
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               362-619
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 141
               

               Conread position:
               368-619
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               370-618
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               13, 58
               

               Conread position:
               370-619
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               384-636
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 244
               

               Conread position:
               385-637
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 156
               

               Conread position:
               385-693
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               100, 21
               

               Conread position:
               386-623
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               35, 24
               

               Conread position:
               424-631
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               39, 74
               

               Conread position:
               430-574
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               56, 91
               

               Conread position:
               430-581
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               430-619
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               60, 69
               

               Conread position:
               430-619
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               33, 46
               

               Conread position:
               430-623
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               430-690
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               60, 197
               

               Conread position:
               431-616
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               431-714
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               434-623
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               151
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               434-657
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               15, 155
               

               Conread position:
               434-688
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               44, 153
               

               Conread position:
               436-617
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               436-619
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 7
               

               Conread position:
               436-690
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 14
               

               Conread position:
               443-618
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               45, 97
               

               Conread position:
               447-623
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               116, 34
               

               Conread position:
               448-618
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               42, 145
               

               Conread position:
               449-619
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               451-619
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               455-616
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               26, 140
               

               Conread position:
               457-620
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               464-677
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               11, 6
               

               Conread position:
               465-624
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               489-618
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               491-623
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               492-692
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               493-621
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               493-623
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               114, 94
               

               Conread position:
               493-633
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               493-650
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 99
               

               Conread position:
               512-627
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               547-633
               

               Cow position:
               
               

               Alignm length:
               87
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.