Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8068J22.3
        

               Conread position:
               174-429
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               7, 66
               

               Conread position:
               176-376
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               180-628
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 16
               

               Conread position:
               183-617
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 74
               

               Conread position:
               183-623
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               306
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               33, 224
               

               Conread position:
               185-350
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               114, 85
               

               Conread position:
               188-332
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               189-431
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               190-346
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 29
               

               Conread position:
               190-407
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               191-416
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               191-431
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               80, 173
               

               Conread position:
               191-617
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 43
               

               Conread position:
               192-407
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               192-415
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               80, 133
               

               Conread position:
               192-422
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               192-431
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 178
               

               Conread position:
               192-615
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 53
               

               Conread position:
               192-617
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 30
               

               Conread position:
               192-618
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               192-622
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 9
               

               Conread position:
               192-642
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 19
               

               Conread position:
               193-612
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               74, 24
               

               Conread position:
               193-619
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 220
               

               Conread position:
               194-619
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 347
               

               Conread position:
               195-407
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               72, 166
               

               Conread position:
               199-432
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               202-619
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 51
               

               Conread position:
               203-431
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               64, 178
               

               Conread position:
               205-619
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 206
               

               Conread position:
               225-455
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               233-618
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               255-432
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               255-620
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               12, 137
               

               Conread position:
               294-619
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               41, 59
               

               Conread position:
               309-623
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 90
               

               Conread position:
               312-622
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               236
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               316-638
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 25
               

               Conread position:
               319-617
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               347-623
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 94
               

               Conread position:
               353-619
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 56
               

               Conread position:
               361-619
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               10, 40
               

               Conread position:
               362-565
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               362-615
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               364-632
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 60
               

               Conread position:
               367-628
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               413-618
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               77, 150
               

               Conread position:
               423-623
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               430-618
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               151
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               430-618
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               430-619
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               430-619
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               430-619
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               53, 90
               

               Conread position:
               430-620
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               430-623
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 8
               

               Conread position:
               430-648
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               431-613
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               35, 162
               

               Conread position:
               434-623
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 136
               

               Conread position:
               434-623
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               154
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               83, 59
               

               Conread position:
               434-691
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               47, 102
               

               Conread position:
               436-601
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               436-690
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               43, 133
               

               Conread position:
               445-619
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               43, 64
               

               Conread position:
               448-618
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               450-623
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               41, 79
               

               Conread position:
               456-620
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               34, 62
               

               Conread position:
               457-595
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               458-619
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 115
               

               Conread position:
               462-619
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               20, 93
               

               Conread position:
               492-619
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               493-619
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               493-658
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               131, 66
               

               Conread position:
               494-623
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               508-619
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               29, 0
               
Show alignments to all cow chromosomes.