Cow genome map
Conread name: | Ss1.1-Pig4-TMW8068J22.3 |
Conread position: | 174-429 |
Cow position: | chr16:11354730-11354464 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 195 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 7, 66 |
Conread position: | 176-376 |
Cow position: | chr16:40664745-40664959 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 156 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 180-628 |
Cow position: | chr16:12729413-12728960 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 16 |
Conread position: | 183-617 |
Cow position: | chr16:11588716-11588269 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 74 |
Conread position: | 183-623 |
Cow position: | chr16:55087563-55087119 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 306 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 33, 224 |
Conread position: | 185-350 |
Cow position: | chr16:2538027-2537857 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 127 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 114, 85 |
Conread position: | 188-332 |
Cow position: | chr16:23412844-23412689 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 118 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 189-431 |
Cow position: | chr16:24890581-24890325 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 188 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 190-346 |
Cow position: | chr16:23006778-23006939 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 121 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 9, 29 |
Conread position: | 190-407 |
Cow position: | chr16:22607109-22606877 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 164 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 191-416 |
Cow position: | chr16:19311489-19311250 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 172 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 191-431 |
Cow position: | chr16:11336292-11336039 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 182 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 80, 173 |
Conread position: | 191-617 |
Cow position: | chr16:51805700-51805289 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 43 |
Conread position: | 192-407 |
Cow position: | chr16:28424221-28423982 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 174 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 192-415 |
Cow position: | chr16:15318689-15318911 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 167 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 80, 133 |
Conread position: | 192-422 |
Cow position: | chr16:42338048-42338281 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 177 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 7, 17 |
Conread position: | 192-431 |
Cow position: | chr16:37365137-37364889 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 174 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 60, 178 |
Conread position: | 192-615 |
Cow position: | chr16:13411284-13411706 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 53 |
Conread position: | 192-617 |
Cow position: | chr16:50816610-50816200 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 30 |
Conread position: | 192-618 |
Cow position: | chr16:44753615-44754040 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 26 |
Conread position: | 192-622 |
Cow position: | chr16:34866989-34866554 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 9 |
Conread position: | 192-642 |
Cow position: | chr16:598925-598489 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 19 |
Conread position: | 193-612 |
Cow position: | chr16:35159919-35159517 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 302 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 74, 24 |
Conread position: | 193-619 |
Cow position: | chr16:33149557-33149977 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 220 |
Conread position: | 194-619 |
Cow position: | chr16:38331944-38332378 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 347 |
Conread position: | 195-407 |
Cow position: | chr16:13816349-13816128 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 161 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 72, 166 |
Conread position: | 199-432 |
Cow position: | chr16:22770131-22769882 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 182 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 202-619 |
Cow position: | chr16:13350826-13351239 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 51 |
Conread position: | 203-431 |
Cow position: | chr16:51985001-51984774 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 173 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 64, 178 |
Conread position: | 205-619 |
Cow position: | chr16:31731981-31732393 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 206 |
Conread position: | 225-455 |
Cow position: | chr16:6303302-6303534 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 171 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 47, 82 |
Conread position: | 233-618 |
Cow position: | chr16:25933526-25933912 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 30 |
Conread position: | 255-432 |
Cow position: | chr16:39398693-39398493 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 148 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 255-620 |
Cow position: | chr16:11045010-11044646 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 267 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 12, 137 |
Conread position: | 294-619 |
Cow position: | chr16:55146230-55146547 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 242 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 41, 59 |
Conread position: | 309-623 |
Cow position: | chr16:53269970-53270277 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 90 |
Conread position: | 312-622 |
Cow position: | chr16:3114792-3115104 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 236 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 24, 7 |
Conread position: | 316-638 |
Cow position: | chr16:15995802-15996112 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 25 |
Conread position: | 319-617 |
Cow position: | chr16:30038912-30039234 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 226 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 17, 51 |
Conread position: | 347-623 |
Cow position: | chr16:54925384-54925658 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 94 |
Conread position: | 353-619 |
Cow position: | chr16:34265321-34265049 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 56 |
Conread position: | 361-619 |
Cow position: | chr16:47217293-47217045 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 198 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 10, 40 |
Conread position: | 362-565 |
Cow position: | chr16:2537628-2537445 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 154 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 22, 64 |
Conread position: | 362-615 |
Cow position: | chr16:40665181-40665433 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 77 |
Conread position: | 364-632 |
Cow position: | chr16:2703354-2703090 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 60 |
Conread position: | 367-628 |
Cow position: | chr16:43838915-43838649 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 195 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 413-618 |
Cow position: | chr16:10418178-10418383 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 147 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 77, 150 |
Conread position: | 423-623 |
Cow position: | chr16:27980884-27981072 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 159 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 430-618 |
Cow position: | chr16:18764746-18764560 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 151 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 430-618 |
Cow position: | chr16:23873221-23873408 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 140 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 430-619 |
Cow position: | chr16:13317332-13317525 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 152 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 430-619 |
Cow position: | chr16:15319865-15320056 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 144 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 18, 93 |
Conread position: | 430-619 |
Cow position: | chr16:23410466-23410278 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 147 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 53, 90 |
Conread position: | 430-620 |
Cow position: | chr16:24302962-24303164 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 147 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 430-623 |
Cow position: | chr16:42341253-42341447 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 162 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 8 |
Conread position: | 430-648 |
Cow position: | chr16:26328553-26328772 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 166 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 58, 33 |
Conread position: | 431-613 |
Cow position: | chr16:9410182-9409994 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 150 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 35, 162 |
Conread position: | 434-623 |
Cow position: | chr16:19307354-19307172 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 144 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 56, 136 |
Conread position: | 434-623 |
Cow position: | chr16:52930388-52930578 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 154 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 83, 59 |
Conread position: | 434-691 |
Cow position: | chr16:23007542-23007806 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 194 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 47, 102 |
Conread position: | 436-601 |
Cow position: | chr16:51983627-51983461 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 133 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 45, 29 |
Conread position: | 436-690 |
Cow position: | chr16:47484755-47484504 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 190 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 43, 133 |
Conread position: | 445-619 |
Cow position: | chr16:23636636-23636472 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 133 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 43, 64 |
Conread position: | 448-618 |
Cow position: | chr16:38119630-38119804 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 138 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 450-623 |
Cow position: | chr16:56704447-56704274 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 132 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 41, 79 |
Conread position: | 456-620 |
Cow position: | chr16:37576551-37576721 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 136 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 34, 62 |
Conread position: | 457-595 |
Cow position: | chr16:22766379-22766238 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 458-619 |
Cow position: | chr16:31774283-31774437 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 27, 115 |
Conread position: | 462-619 |
Cow position: | chr16:40802332-40802174 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 20, 93 |
Conread position: | 492-619 |
Cow position: | chr16:11354449-11354322 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 493-619 |
Cow position: | chr16:42287842-42287716 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 99 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 493-658 |
Cow position: | chr16:36914411-36914579 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 133 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 131, 66 |
Conread position: | 494-623 |
Cow position: | chr16:11336025-11335898 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 101 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 508-619 |
Cow position: | chr16:27810190-27810299 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 95 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.