Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8068J22.3
        

               Conread position:
               119-407
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               159-431
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               112, 20
               

               Conread position:
               181-617
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 180
               

               Conread position:
               185-430
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               185-525
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               114, 70
               

               Conread position:
               185-618
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 7
               

               Conread position:
               188-619
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 63
               

               Conread position:
               189-617
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 29
               

               Conread position:
               190-617
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 176
               

               Conread position:
               190-619
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 179
               

               Conread position:
               192-369
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 168
               

               Conread position:
               192-431
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               106, 74
               

               Conread position:
               192-541
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               81, 241
               

               Conread position:
               192-565
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 169
               

               Conread position:
               192-618
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 45
               

               Conread position:
               192-619
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 174
               

               Conread position:
               193-407
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               193-431
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               80, 57
               

               Conread position:
               193-607
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 97
               

               Conread position:
               193-618
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               193-620
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 74
               

               Conread position:
               194-403
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 89
               

               Conread position:
               195-382
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               195-418
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               76, 52
               

               Conread position:
               204-407
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               63, 7
               

               Conread position:
               207-617
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 344
               

               Conread position:
               208-623
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               210-454
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               225-622
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 295
               

               Conread position:
               252-624
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               254-576
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               11, 310
               

               Conread position:
               255-618
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 221
               

               Conread position:
               255-621
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               82, 160
               

               Conread position:
               256-431
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               16, 113
               

               Conread position:
               260-594
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               278-617
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               21, 153
               

               Conread position:
               298-568
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               38, 12
               

               Conread position:
               310-623
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               205
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               26, 198
               

               Conread position:
               347-616
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 62
               

               Conread position:
               357-685
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               72, 102
               

               Conread position:
               362-613
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 76
               

               Conread position:
               362-619
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 79
               

               Conread position:
               364-613
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 50
               

               Conread position:
               365-617
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 120
               

               Conread position:
               372-619
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 99
               

               Conread position:
               385-691
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 31
               

               Conread position:
               422-622
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               42, 17
               

               Conread position:
               424-619
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               48, 180
               

               Conread position:
               426-542
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               428-627
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               60, 129
               

               Conread position:
               430-616
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               430-623
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               430-623
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               52, 113
               

               Conread position:
               434-621
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               49, 77
               

               Conread position:
               437-619
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               440-614
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               440-618
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               448-620
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               450-619
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               38, 92
               

               Conread position:
               456-576
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               458-620
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               26, 74
               

               Conread position:
               463-676
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               104, 185
               

               Conread position:
               466-618
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               483-605
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               493-622
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               71, 28
               

               Conread position:
               496-622
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 0
               
Show alignments to all cow chromosomes.