Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8068J22.3
        

               Conread position:
               179-623
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 224
               

               Conread position:
               179-656
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 138
               

               Conread position:
               183-397
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 109
               

               Conread position:
               186-622
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 252
               

               Conread position:
               187-350
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               187-407
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               187-623
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               306
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               84, 62
               

               Conread position:
               190-407
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               106, 62
               

               Conread position:
               190-423
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               191-431
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               192-350
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 109
               

               Conread position:
               192-395
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               67, 137
               

               Conread position:
               192-407
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               192-412
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               192-415
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               192-431
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               73, 194
               

               Conread position:
               192-431
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               111, 149
               

               Conread position:
               192-533
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               75, 236
               

               Conread position:
               192-617
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 37
               

               Conread position:
               192-624
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 237
               

               Conread position:
               192-633
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 314
               

               Conread position:
               192-633
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 57
               

               Conread position:
               193-618
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 78
               

               Conread position:
               194-620
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 129
               

               Conread position:
               196-561
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 119
               

               Conread position:
               199-402
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               72, 48
               

               Conread position:
               199-620
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 48
               

               Conread position:
               208-429
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               61, 153
               

               Conread position:
               208-617
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 58
               

               Conread position:
               210-526
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               239
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               54, 84
               

               Conread position:
               211-619
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 150
               

               Conread position:
               223-616
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               225-623
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               295
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               47, 183
               

               Conread position:
               251-602
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 166
               

               Conread position:
               255-619
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               16, 112
               

               Conread position:
               275-431
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 149
               

               Conread position:
               300-560
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               36, 168
               

               Conread position:
               304-620
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               32, 53
               

               Conread position:
               314-523
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               32, 42
               

               Conread position:
               322-542
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               345-618
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               11, 86
               

               Conread position:
               358-520
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               358-619
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 116
               

               Conread position:
               363-650
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               370-619
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               13, 59
               

               Conread position:
               370-620
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               65, 7
               

               Conread position:
               395-677
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               40, 81
               

               Conread position:
               421-616
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               59, 75
               

               Conread position:
               430-611
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               430-619
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               430-642
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               127, 48
               

               Conread position:
               432-615
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               48, 91
               

               Conread position:
               433-619
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               17, 5
               

               Conread position:
               434-619
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               434-619
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               50, 92
               

               Conread position:
               434-619
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               54, 26
               

               Conread position:
               435-619
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               448-637
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               448-701
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               39, 84
               

               Conread position:
               450-608
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               450-620
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               450-621
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               35, 90
               

               Conread position:
               457-617
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               31, 84
               

               Conread position:
               457-617
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               472-623
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               483-619
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               489-620
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               63, 48
               

               Conread position:
               493-619
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               496-619
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               44, 36
               

               Conread position:
               496-623
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.