Cow genome map

Conread name: Ss1.1-Pig4-TMW8068J22.3

Conread position: 138-579
Cow position:
Alignm length: 452
Alignm identity: 306
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 113, 27

Conread position: 175-430
Cow position:
Alignm length: 274
Alignm identity: 202
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 18, 0

Conread position: 176-391
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 91, 16

Conread position: 184-420
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 11

Conread position: 184-430
Cow position:
Alignm length: 263
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 7, 207

Conread position: 186-407
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 174

Conread position: 187-397
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 54

Conread position: 187-623
Cow position:
Alignm length: 447
Alignm identity: 304
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 80, 36

Conread position: 190-431
Cow position:
Alignm length: 251
Alignm identity: 180
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 81, 155

Conread position: 190-436
Cow position:
Alignm length: 257
Alignm identity: 181
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 115, 63

Conread position: 190-617
Cow position:
Alignm length: 438
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 42

Conread position: 190-638
Cow position:
Alignm length: 457
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 238

Conread position: 191-407
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 191-407
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 72, 195

Conread position: 191-431
Cow position:
Alignm length: 263
Alignm identity: 191
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 191-431
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 85, 171

Conread position: 191-535
Cow position:
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 31

Conread position: 191-619
Cow position:
Alignm length: 444
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 51

Conread position: 192-397
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 192-422
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 29, 172

Conread position: 192-424
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 79, 159

Conread position: 192-431
Cow position:
Alignm length: 255
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 75, 208

Conread position: 192-431
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 72, 30

Conread position: 192-431
Cow position:
Alignm length: 249
Alignm identity: 182
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 7, 197

Conread position: 192-431
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 106, 26

Conread position: 192-431
Cow position:
Alignm length: 252
Alignm identity: 187
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 104, 23

Conread position: 192-431
Cow position:
Alignm length: 255
Alignm identity: 182
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 191

Conread position: 192-431
Cow position:
Alignm length: 254
Alignm identity: 192
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 75, 0

Conread position: 192-535
Cow position:
Alignm length: 360
Alignm identity: 255
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 79, 58

Conread position: 192-586
Cow position:
Alignm length: 408
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 58

Conread position: 192-601
Cow position:
Alignm length: 420
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 59

Conread position: 192-613
Cow position:
Alignm length: 447
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 30

Conread position: 192-617
Cow position:
Alignm length: 441
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 162

Conread position: 192-619
Cow position:
Alignm length: 453
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 160

Conread position: 192-620
Cow position:
Alignm length: 440
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 85

Conread position: 192-621
Cow position:
Alignm length: 450
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 243

Conread position: 192-632
Cow position:
Alignm length: 460
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 193-372
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 166

Conread position: 193-376
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 78, 41

Conread position: 193-628
Cow position:
Alignm length: 450
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 167

Conread position: 194-380
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 65, 23

Conread position: 194-411
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 101, 23

Conread position: 194-622
Cow position:
Alignm length: 440
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 69

Conread position: 195-428
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 72, 103

Conread position: 195-431
Cow position:
Alignm length: 259
Alignm identity: 189
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 72, 213

Conread position: 196-628
Cow position:
Alignm length: 444
Alignm identity: 299
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 71, 15

Conread position: 202-380
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 202-419
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 71, 181

Conread position: 202-460
Cow position:
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 191

Conread position: 202-619
Cow position:
Alignm length: 440
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 69

Conread position: 203-491
Cow position:
Alignm length: 305
Alignm identity: 207
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 156

Conread position: 203-623
Cow position:
Alignm length: 433
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 290

Conread position: 208-360
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 208-419
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 173

Conread position: 208-560
Cow position:
Alignm length: 365
Alignm identity: 256
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 59, 83

Conread position: 219-409
Cow position:
Alignm length: 199
Alignm identity: 153
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 48, 137

Conread position: 225-431
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 78

Conread position: 239-631
Cow position:
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 80

Conread position: 240-618
Cow position:
Alignm length: 385
Alignm identity: 266
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 25, 67

Conread position: 247-431
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 248-620
Cow position:
Alignm length: 388
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 102

Conread position: 256-619
Cow position:
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 111

Conread position: 272-478
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 298-432
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 355-618
Cow position:
Alignm length: 272
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 6

Conread position: 363-631
Cow position:
Alignm length: 275
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 38

Conread position: 366-620
Cow position:
Alignm length: 262
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 136

Conread position: 382-620
Cow position:
Alignm length: 242
Alignm identity: 188
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 184, 46

Conread position: 385-620
Cow position:
Alignm length: 241
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 122

Conread position: 401-619
Cow position:
Alignm length: 221
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 65

Conread position: 406-619
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 23, 84

Conread position: 415-680
Cow position:
Alignm length: 276
Alignm identity: 188
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 12

Conread position: 416-692
Cow position:
Alignm length: 280
Alignm identity: 198
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 256, 174

Conread position: 417-617
Cow position:
Alignm length: 204
Alignm identity: 158
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 69, 0

Conread position: 418-615
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 17, 8

Conread position: 423-618
Cow position:
Alignm length: 199
Alignm identity: 156
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 67, 0

Conread position: 430-618
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 430-619
Cow position:
Alignm length: 192
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 109

Conread position: 430-619
Cow position:
Alignm length: 190
Alignm identity: 152
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 157, 0

Conread position: 430-619
Cow position:
Alignm length: 194
Alignm identity: 155
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 51, 10

Conread position: 430-619
Cow position:
Alignm length: 192
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 109

Conread position: 430-619
Cow position:
Alignm length: 193
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 430-621
Cow position:
Alignm length: 198
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 103

Conread position: 430-718
Cow position:
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 38

Conread position: 431-564
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 431-618
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 155, 73

Conread position: 431-619
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 431-619
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 59, 50

Conread position: 431-620
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 432-619
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 13

Conread position: 434-596
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 434-628
Cow position:
Alignm length: 198
Alignm identity: 157
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 53, 101

Conread position: 434-645
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 434-690
Cow position:
Alignm length: 267
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 153

Conread position: 436-623
Cow position:
Alignm length: 191
Alignm identity: 152
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 437-633
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 130

Conread position: 437-659
Cow position:
Alignm length: 227
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 33

Conread position: 438-617
Cow position:
Alignm length: 183
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 92

Conread position: 438-619
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 10

Conread position: 445-619
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 156

Conread position: 448-624
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 450-619
Cow position:
Alignm length: 171
Alignm identity: 138
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 110, 0

Conread position: 450-619
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 140, 15

Conread position: 451-628
Cow position:
Alignm length: 182
Alignm identity: 147
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 8, 82

Conread position: 452-616
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 46

Conread position: 453-620
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 41

Conread position: 454-681
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 171, 0

Conread position: 457-635
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 25, 172

Conread position: 458-623
Cow position:
Alignm length: 166
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 458-632
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 459-617
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 459-624
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 82

Conread position: 461-620
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 24, 47

Conread position: 465-620
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 483-617
Cow position:
Alignm length: 136
Alignm identity: 112
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 114, 0

Conread position: 483-653
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 74

Conread position: 489-623
Cow position:
Alignm length: 136
Alignm identity: 112
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 492-618
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 493-617
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 493-685
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 122, 14

Conread position: 508-630
Cow position:
Alignm length: 123
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 523-619
Cow position:
Alignm length: 97
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 524-618
Cow position:
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.