Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8068J22.3
        

               Conread position:
               147-630
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               315
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               122, 17
               

               Conread position:
               171-431
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               100, 53
               

               Conread position:
               187-407
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               82, 169
               

               Conread position:
               188-562
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               281
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               111, 74
               

               Conread position:
               189-379
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 21
               

               Conread position:
               189-431
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               78, 132
               

               Conread position:
               190-325
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 63
               

               Conread position:
               190-620
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 109
               

               Conread position:
               191-332
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 42
               

               Conread position:
               191-390
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 150
               

               Conread position:
               191-618
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 140
               

               Conread position:
               191-625
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 253
               

               Conread position:
               192-407
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               72, 185
               

               Conread position:
               192-422
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               156, 89
               

               Conread position:
               192-431
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               75, 209
               

               Conread position:
               192-431
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               75, 177
               

               Conread position:
               192-617
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               299
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               42, 251
               

               Conread position:
               192-619
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 196
               

               Conread position:
               192-619
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               298
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               81, 165
               

               Conread position:
               192-690
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 31
               

               Conread position:
               193-431
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               74, 84
               

               Conread position:
               193-619
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 320
               

               Conread position:
               193-623
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 141
               

               Conread position:
               198-407
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               5, 180
               

               Conread position:
               203-431
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               96, 63
               

               Conread position:
               203-615
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 104
               

               Conread position:
               208-388
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               220-622
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 53
               

               Conread position:
               223-637
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 161
               

               Conread position:
               224-431
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               225-491
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               49, 129
               

               Conread position:
               238-658
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 12
               

               Conread position:
               239-429
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               34, 121
               

               Conread position:
               245-622
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 169
               

               Conread position:
               298-616
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 81
               

               Conread position:
               299-616
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               27, 44
               

               Conread position:
               306-590
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               30, 99
               

               Conread position:
               307-619
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 91
               

               Conread position:
               310-616
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               26, 120
               

               Conread position:
               316-691
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               346-623
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               353-617
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               16, 42
               

               Conread position:
               357-620
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               361-619
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               364-619
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               365-617
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 234
               

               Conread position:
               370-611
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               13, 103
               

               Conread position:
               382-617
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               97, 46
               

               Conread position:
               409-619
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               79, 7
               

               Conread position:
               424-622
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               424-622
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               430-610
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               14, 96
               

               Conread position:
               430-619
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               430-619
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               430-619
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               154
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               430-623
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               58, 153
               

               Conread position:
               430-625
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               29, 145
               

               Conread position:
               432-629
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               53, 70
               

               Conread position:
               434-618
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               434-620
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               57, 88
               

               Conread position:
               435-623
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               156
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               51, 141
               

               Conread position:
               436-689
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 240
               

               Conread position:
               438-619
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               12, 8
               

               Conread position:
               439-617
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 9
               

               Conread position:
               445-631
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               457-618
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               14, 75
               

               Conread position:
               459-618
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               60, 13
               

               Conread position:
               459-619
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               464-623
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               26, 129
               

               Conread position:
               465-638
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               496-619
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               496-675
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               5, 59
               
Show alignments to all cow chromosomes.