Cow genome map
Conread name: | Ss1.1-Pig4-TMW8068J22.3 |
Conread position: | 147-630 |
Cow position: | chr21:20385397-20384944 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 315 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 122, 17 |
Conread position: | 171-431 |
Cow position: | chr21:33197210-33196949 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 201 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 100, 53 |
Conread position: | 187-407 |
Cow position: | chr21:37367813-37367584 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 174 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 82, 169 |
Conread position: | 188-562 |
Cow position: | chr21:13455707-13455342 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 281 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 111, 74 |
Conread position: | 189-379 |
Cow position: | chr21:11299756-11299956 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 144 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 81, 21 |
Conread position: | 189-431 |
Cow position: | chr21:42906296-42906546 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 178 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 78, 132 |
Conread position: | 190-325 |
Cow position: | chr21:30218515-30218656 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 110 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 77, 63 |
Conread position: | 190-620 |
Cow position: | chr21:34415687-34416108 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 109 |
Conread position: | 191-332 |
Cow position: | chr21:28157942-28158083 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 76, 42 |
Conread position: | 191-390 |
Cow position: | chr21:12453194-12452982 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 155 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 81, 150 |
Conread position: | 191-618 |
Cow position: | chr21:4262099-4261676 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 140 |
Conread position: | 191-625 |
Cow position: | chr21:26869319-26869766 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 253 |
Conread position: | 192-407 |
Cow position: | chr21:49646971-49647195 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 172 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 72, 185 |
Conread position: | 192-422 |
Cow position: | chr21:16776210-16776439 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 172 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 156, 89 |
Conread position: | 192-431 |
Cow position: | chr21:17382295-17382536 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 181 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 75, 209 |
Conread position: | 192-431 |
Cow position: | chr21:18082605-18082357 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 182 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 75, 177 |
Conread position: | 192-617 |
Cow position: | chr21:40214079-40214498 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 299 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 42, 251 |
Conread position: | 192-619 |
Cow position: | chr21:28147933-28148372 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 196 |
Conread position: | 192-619 |
Cow position: | chr21:37197502-37197097 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 298 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 81, 165 |
Conread position: | 192-690 |
Cow position: | chr21:16337243-16336761 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 31 |
Conread position: | 193-431 |
Cow position: | chr21:17223952-17223703 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 174 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 74, 84 |
Conread position: | 193-619 |
Cow position: | chr21:38927062-38926620 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 320 |
Conread position: | 193-623 |
Cow position: | chr21:45299417-45298981 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 141 |
Conread position: | 198-407 |
Cow position: | chr21:448226-448446 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 160 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 5, 180 |
Conread position: | 203-431 |
Cow position: | chr21:47730858-47730621 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 181 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 96, 63 |
Conread position: | 203-615 |
Cow position: | chr21:7168795-7169210 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 104 |
Conread position: | 208-388 |
Cow position: | chr21:30616122-30616314 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 145 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 220-622 |
Cow position: | chr21:29834156-29834532 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 53 |
Conread position: | 223-637 |
Cow position: | chr21:33974165-33973744 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 161 |
Conread position: | 224-431 |
Cow position: | chr21:27199869-27199646 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 161 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 225-491 |
Cow position: | chr21:1721334-1721059 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 210 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 49, 129 |
Conread position: | 238-658 |
Cow position: | chr21:29868748-29868326 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 12 |
Conread position: | 239-429 |
Cow position: | chr21:43038189-43037993 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 145 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 34, 121 |
Conread position: | 245-622 |
Cow position: | chr21:22743868-22744263 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 169 |
Conread position: | 298-616 |
Cow position: | chr21:10796475-10796148 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 81 |
Conread position: | 299-616 |
Cow position: | chr21:45963067-45963405 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 240 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 27, 44 |
Conread position: | 306-590 |
Cow position: | chr21:908154-907880 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 212 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 30, 99 |
Conread position: | 307-619 |
Cow position: | chr21:24090144-24089828 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 91 |
Conread position: | 310-616 |
Cow position: | chr21:43803727-43804028 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 224 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 26, 120 |
Conread position: | 316-691 |
Cow position: | chr21:34167064-34167413 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 267 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 67, 26 |
Conread position: | 346-623 |
Cow position: | chr21:10120380-10120662 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 26 |
Conread position: | 353-617 |
Cow position: | chr21:11300190-11300457 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 203 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 16, 42 |
Conread position: | 357-620 |
Cow position: | chr21:18782452-18782711 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 200 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 26, 13 |
Conread position: | 361-619 |
Cow position: | chr21:30171034-30171285 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 197 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 19, 55 |
Conread position: | 364-619 |
Cow position: | chr21:9446543-9446292 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 11 |
Conread position: | 365-617 |
Cow position: | chr21:41540102-41540359 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 234 |
Conread position: | 370-611 |
Cow position: | chr21:8176137-8176380 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 184 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 13, 103 |
Conread position: | 382-617 |
Cow position: | chr21:6690240-6690466 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 178 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 97, 46 |
Conread position: | 409-619 |
Cow position: | chr21:36952811-36952607 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 168 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 79, 7 |
Conread position: | 424-622 |
Cow position: | chr21:8381532-8381735 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 166 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 424-622 |
Cow position: | chr21:17384102-17384289 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 152 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 430-610 |
Cow position: | chr21:16800396-16800212 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 139 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 14, 96 |
Conread position: | 430-619 |
Cow position: | chr21:3354871-3354687 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 146 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 430-619 |
Cow position: | chr21:18080457-18080271 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 143 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 430-619 |
Cow position: | chr21:42907016-42907208 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 154 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 430-623 |
Cow position: | chr21:27197881-27197686 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 145 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 58, 153 |
Conread position: | 430-625 |
Cow position: | chr21:34174314-34174115 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 153 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 29, 145 |
Conread position: | 432-629 |
Cow position: | chr21:12450785-12450588 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 157 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 53, 70 |
Conread position: | 434-618 |
Cow position: | chr21:45450833-45450639 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 148 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 434-620 |
Cow position: | chr21:30221350-30221535 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 140 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 57, 88 |
Conread position: | 435-623 |
Cow position: | chr21:33196608-33196418 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 156 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 51, 141 |
Conread position: | 436-689 |
Cow position: | chr21:38863377-38863635 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 240 |
Conread position: | 438-619 |
Cow position: | chr21:3210732-3210907 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 145 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 12, 8 |
Conread position: | 439-617 |
Cow position: | chr21:4888679-4888499 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 133 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 41, 9 |
Conread position: | 445-631 |
Cow position: | chr21:10820329-10820140 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 139 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 457-618 |
Cow position: | chr21:32334208-32334046 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 130 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 14, 75 |
Conread position: | 459-618 |
Cow position: | chr21:46898937-46899093 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 60, 13 |
Conread position: | 459-619 |
Cow position: | chr21:13501545-13501390 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 126 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 12, 22 |
Conread position: | 464-623 |
Cow position: | chr21:6847311-6847472 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 121 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 26, 129 |
Conread position: | 465-638 |
Cow position: | chr21:37310806-37310630 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 140 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 20, 59 |
Conread position: | 496-619 |
Cow position: | chr21:47730604-47730481 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 95 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 496-675 |
Cow position: | chr21:27769860-27770040 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 140 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 5, 59 |
Show alignments to all cow chromosomes.