Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8068J22.3
        

               Conread position:
               137-581
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               159-619
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 14
               

               Conread position:
               171-431
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               19, 195
               

               Conread position:
               177-621
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 194
               

               Conread position:
               187-331
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               188-431
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               111, 69
               

               Conread position:
               189-623
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               305
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               147, 46
               

               Conread position:
               190-420
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               190-619
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 92
               

               Conread position:
               190-623
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 210
               

               Conread position:
               192-392
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               107, 17
               

               Conread position:
               192-524
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               72, 245
               

               Conread position:
               192-616
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               303
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               80, 45
               

               Conread position:
               192-619
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 149
               

               Conread position:
               192-620
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 28
               

               Conread position:
               192-620
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 169
               

               Conread position:
               193-371
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               71, 177
               

               Conread position:
               193-381
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               76, 166
               

               Conread position:
               193-431
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               194-619
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 237
               

               Conread position:
               196-375
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               202-405
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               202-619
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               304
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               65, 167
               

               Conread position:
               202-623
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 155
               

               Conread position:
               204-407
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               95, 67
               

               Conread position:
               207-619
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 244
               

               Conread position:
               208-635
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 148
               

               Conread position:
               214-431
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               220-431
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               73, 144
               

               Conread position:
               225-623
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               254-618
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               20, 137
               

               Conread position:
               255-691
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 39
               

               Conread position:
               268-431
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               268-619
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 76
               

               Conread position:
               286-635
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               311-579
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               25, 67
               

               Conread position:
               316-618
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               329-621
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               358-622
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               25, 85
               

               Conread position:
               362-619
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               370-632
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               388-634
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 76
               

               Conread position:
               423-529
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               430-619
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               50, 108
               

               Conread position:
               434-624
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               436-623
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               38, 111
               

               Conread position:
               439-621
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               153
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               44, 81
               

               Conread position:
               450-604
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               493-619
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               496-619
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 6
               

               Conread position:
               508-681
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               112, 50
               
Show alignments to all cow chromosomes.