Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8068J22.3
        

               Conread position:
               158-623
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 65
               

               Conread position:
               169-431
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               169-623
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 69
               

               Conread position:
               179-621
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 92
               

               Conread position:
               186-431
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               86, 50
               

               Conread position:
               189-691
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 142
               

               Conread position:
               191-424
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               145, 49
               

               Conread position:
               192-431
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               74, 167
               

               Conread position:
               192-520
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               107, 88
               

               Conread position:
               192-561
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               265
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               81, 62
               

               Conread position:
               192-618
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 64
               

               Conread position:
               192-619
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               296
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               79, 132
               

               Conread position:
               192-623
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 87
               

               Conread position:
               192-636
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               307
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               61, 82
               

               Conread position:
               193-376
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               78, 172
               

               Conread position:
               193-634
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 203
               

               Conread position:
               194-619
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               295
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               77, 23
               

               Conread position:
               194-639
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 113
               

               Conread position:
               195-323
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 68
               

               Conread position:
               199-431
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               74, 46
               

               Conread position:
               199-617
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 134
               

               Conread position:
               207-623
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               208-430
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               209-431
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               90, 62
               

               Conread position:
               209-634
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 25
               

               Conread position:
               211-562
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               90, 145
               

               Conread position:
               211-605
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 213
               

               Conread position:
               215-619
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               293
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               54, 113
               

               Conread position:
               218-633
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               219-624
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 98
               

               Conread position:
               233-651
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               292
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               41, 129
               

               Conread position:
               238-410
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 121
               

               Conread position:
               251-431
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 137
               

               Conread position:
               255-623
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 187
               

               Conread position:
               298-455
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               48, 146
               

               Conread position:
               298-586
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               37, 63
               

               Conread position:
               299-615
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 124
               

               Conread position:
               301-617
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               318-617
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               18, 90
               

               Conread position:
               347-618
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               36, 14
               

               Conread position:
               347-619
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               36, 8
               

               Conread position:
               348-623
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               37, 80
               

               Conread position:
               348-623
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               362-499
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               21, 89
               

               Conread position:
               362-618
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               363-611
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 44
               

               Conread position:
               363-619
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               114, 50
               

               Conread position:
               363-619
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               364-601
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 122
               

               Conread position:
               422-640
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               192, 53
               

               Conread position:
               430-597
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               23, 156
               

               Conread position:
               430-618
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               430-623
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               128, 48
               

               Conread position:
               430-630
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               437-629
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               440-561
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               448-618
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               450-638
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               456-618
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               457-581
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               470-619
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               481-665
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               78, 15
               

               Conread position:
               488-618
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               519-642
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               95, 0
               
Show alignments to all cow chromosomes.