Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8068J22.3 |
| Conread position: | 186-424 |
| Cow position: | chr26:18945463-18945222 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 87, 121 |
| Conread position: | 187-389 |
| Cow position: | chr26:20213188-20212982 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 117, 186 |
| Conread position: | 189-617 |
| Cow position: | chr26:15970494-15970074 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 24 |
| Conread position: | 190-444 |
| Cow position: | chr26:5530134-5529865 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 7, 174 |
| Conread position: | 190-613 |
| Cow position: | chr26:19748673-19749111 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 240 |
| Conread position: | 191-618 |
| Cow position: | chr26:20785020-20785448 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 68 |
| Conread position: | 192-381 |
| Cow position: | chr26:12985353-12985556 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 192-386 |
| Cow position: | chr26:25370739-25370544 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 60, 71 |
| Conread position: | 192-391 |
| Cow position: | chr26:30579402-30579200 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 147 |
| Conread position: | 192-431 |
| Cow position: | chr26:17098055-17097807 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 75, 236 |
| Conread position: | 192-431 |
| Cow position: | chr26:30731669-30731418 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 192-431 |
| Cow position: | chr26:34696774-34696525 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 79, 185 |
| Conread position: | 192-618 |
| Cow position: | chr26:7122540-7122964 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 252 |
| Conread position: | 192-619 |
| Cow position: | chr26:27582546-27582139 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 68 |
| Conread position: | 193-619 |
| Cow position: | chr26:27206729-27206278 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 424 |
| Conread position: | 202-431 |
| Cow position: | chr26:33860746-33860502 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 208-407 |
| Cow position: | chr26:19846314-19846107 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 136 |
| Conread position: | 209-431 |
| Cow position: | chr26:30527510-30527751 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 212-519 |
| Cow position: | chr26:27795151-27794852 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 212-623 |
| Cow position: | chr26:8169539-8169970 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 292 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 93, 161 |
| Conread position: | 225-425 |
| Cow position: | chr26:24227491-24227280 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 46, 135 |
| Conread position: | 228-623 |
| Cow position: | chr26:18957017-18956638 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 178 |
| Conread position: | 238-611 |
| Cow position: | chr26:232848-233200 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 271 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 240, 34 |
| Conread position: | 238-633 |
| Cow position: | chr26:14348683-14349089 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 126 |
| Conread position: | 254-620 |
| Cow position: | chr26:21625163-21625524 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 109 |
| Conread position: | 255-690 |
| Cow position: | chr26:17760244-17759816 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 325-619 |
| Cow position: | chr26:27593274-27593562 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 335-620 |
| Cow position: | chr26:5393384-5393658 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 215 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 362-618 |
| Cow position: | chr26:32471442-32471191 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 362-623 |
| Cow position: | chr26:24611220-24610953 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 365-620 |
| Cow position: | chr26:25394251-25394486 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 405-628 |
| Cow position: | chr26:8338961-8339180 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 85, 32 |
| Conread position: | 413-617 |
| Cow position: | chr26:2369758-2369557 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 423-623 |
| Cow position: | chr26:35173447-35173649 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 67, 137 |
| Conread position: | 430-619 |
| Cow position: | chr26:7157022-7156829 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 430-619 |
| Cow position: | chr26:20605246-20605055 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 430-623 |
| Cow position: | chr26:691985-692177 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 155 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 430-623 |
| Cow position: | chr26:20212713-20212516 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 430-719 |
| Cow position: | chr26:30729051-30728772 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 431-617 |
| Cow position: | chr26:3955745-3955934 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 431-620 |
| Cow position: | chr26:6969714-6969540 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 434-598 |
| Cow position: | chr26:24224541-24224702 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 140 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 125, 47 |
| Conread position: | 435-695 |
| Cow position: | chr26:24226159-24225897 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 55, 104 |
| Conread position: | 440-619 |
| Cow position: | chr26:23289487-23289659 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 445-619 |
| Cow position: | chr26:18943326-18943150 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 450-706 |
| Cow position: | chr26:23806534-23806796 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 463-619 |
| Cow position: | chr26:17121228-17121068 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 496-636 |
| Cow position: | chr26:30527767-30527905 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 499-620 |
| Cow position: | chr26:20303739-20303860 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 83 |
| Conread position: | 500-618 |
| Cow position: | chr26:33860482-33860365 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 73, 37 |
Show alignments to all cow chromosomes.