Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8068J22.3 |
| Conread position: | 184-407 |
| Cow position: | chr27:20607078-20606841 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 115, 58 |
| Conread position: | 190-378 |
| Cow position: | chr27:11152004-11151807 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 191-421 |
| Cow position: | chr27:23323370-23323609 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 192-407 |
| Cow position: | chr27:20560005-20559780 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 193-567 |
| Cow position: | chr27:10003196-10002832 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 105, 68 |
| Conread position: | 195-623 |
| Cow position: | chr27:18208880-18209300 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 309 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 30, 23 |
| Conread position: | 202-430 |
| Cow position: | chr27:13238161-13237936 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 202-619 |
| Cow position: | chr27:7207895-7208299 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 204-620 |
| Cow position: | chr27:26070927-26071344 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 190 |
| Conread position: | 208-431 |
| Cow position: | chr27:20132515-20132285 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 65, 126 |
| Conread position: | 244-655 |
| Cow position: | chr27:4065034-4064618 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 256-636 |
| Cow position: | chr27:16536936-16537306 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 95 |
| Conread position: | 303-619 |
| Cow position: | chr27:7017152-7017459 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 22, 129 |
| Conread position: | 306-619 |
| Cow position: | chr27:14242809-14242490 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 335-618 |
| Cow position: | chr27:15011529-15011254 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 370-615 |
| Cow position: | chr27:11151270-11151026 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 370-623 |
| Cow position: | chr27:4146254-4146508 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 24 |
| Conread position: | 385-619 |
| Cow position: | chr27:17850372-17850602 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 65, 42 |
| Conread position: | 415-618 |
| Cow position: | chr27:29487665-29487871 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 430-580 |
| Cow position: | chr27:1169235-1169082 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 430-618 |
| Cow position: | chr27:22437145-22436955 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 55, 138 |
| Conread position: | 430-619 |
| Cow position: | chr27:11055742-11055548 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 57, 172 |
| Conread position: | 430-619 |
| Cow position: | chr27:20128225-20128032 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 52, 145 |
| Conread position: | 430-623 |
| Cow position: | chr27:7029229-7029415 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 134, 34 |
| Conread position: | 430-623 |
| Cow position: | chr27:19785073-19784887 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 432-618 |
| Cow position: | chr27:31468030-31467850 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 434-619 |
| Cow position: | chr27:6669354-6669537 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 152 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 435-618 |
| Cow position: | chr27:15124047-15123867 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 52, 99 |
| Conread position: | 445-619 |
| Cow position: | chr27:24151508-24151685 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 450-689 |
| Cow position: | chr27:18905798-18906034 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 451-572 |
| Cow position: | chr27:27633237-27633362 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 451-616 |
| Cow position: | chr27:27603538-27603370 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 41, 69 |
| Conread position: | 457-580 |
| Cow position: | chr27:12645649-12645770 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 457-619 |
| Cow position: | chr27:23323612-23323784 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 31, 157 |
| Conread position: | 459-591 |
| Cow position: | chr27:30594854-30594729 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 463-619 |
| Cow position: | chr27:15226479-15226623 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 493-621 |
| Cow position: | chr27:14925506-14925387 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 496-619 |
| Cow position: | chr27:11654334-11654212 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 508-615 |
| Cow position: | chr27:14375832-14375727 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.