Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8068J22.3
        

               Conread position:
               178-431
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               91, 58
               

               Conread position:
               183-423
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               88, 173
               

               Conread position:
               183-619
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               187-407
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               80, 21
               

               Conread position:
               190-358
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               77, 99
               

               Conread position:
               190-394
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               81, 63
               

               Conread position:
               190-407
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 115
               

               Conread position:
               190-431
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 27
               

               Conread position:
               190-458
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               81, 176
               

               Conread position:
               190-638
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 255
               

               Conread position:
               191-562
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               80, 179
               

               Conread position:
               192-431
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               75, 155
               

               Conread position:
               192-460
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               80, 166
               

               Conread position:
               192-486
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 153
               

               Conread position:
               192-618
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               303
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               107, 21
               

               Conread position:
               193-375
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 96
               

               Conread position:
               194-381
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 166
               

               Conread position:
               194-392
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               79, 147
               

               Conread position:
               202-396
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 101
               

               Conread position:
               204-431
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               70, 80
               

               Conread position:
               204-617
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 237
               

               Conread position:
               208-392
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               87, 65
               

               Conread position:
               208-532
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 277
               

               Conread position:
               210-695
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 148
               

               Conread position:
               217-637
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               229-424
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 43
               

               Conread position:
               237-623
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               26, 80
               

               Conread position:
               238-431
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               239-431
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               254-595
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               270-623
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 88
               

               Conread position:
               303-609
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               235
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               24, 123
               

               Conread position:
               322-526
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 100
               

               Conread position:
               329-619
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               7, 107
               

               Conread position:
               339-635
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               36, 14
               

               Conread position:
               347-562
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               351-633
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               5, 109
               

               Conread position:
               362-581
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               121, 21
               

               Conread position:
               362-581
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               121, 21
               

               Conread position:
               366-635
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               15, 56
               

               Conread position:
               369-607
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 133
               

               Conread position:
               370-611
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               204, 13
               

               Conread position:
               373-681
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 259
               

               Conread position:
               420-627
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               70, 15
               

               Conread position:
               421-619
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               421-622
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               424-615
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               137, 57
               

               Conread position:
               430-606
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               430-615
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               430-620
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               430-621
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               430-627
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               431-682
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               32, 188
               

               Conread position:
               432-619
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               156
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               56, 67
               

               Conread position:
               433-618
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               154
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               434-611
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               125, 48
               

               Conread position:
               434-617
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               48, 10
               

               Conread position:
               434-619
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               156
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               434-619
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               154
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               48, 97
               

               Conread position:
               434-652
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 97
               

               Conread position:
               434-690
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               180, 55
               

               Conread position:
               437-618
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               49, 98
               

               Conread position:
               437-619
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               55, 70
               

               Conread position:
               437-672
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               50, 94
               

               Conread position:
               444-618
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               37, 136
               

               Conread position:
               445-619
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               45, 112
               

               Conread position:
               448-619
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               450-620
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 52
               

               Conread position:
               462-623
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               18, 50
               

               Conread position:
               463-617
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               483-618
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               483-619
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               125, 88
               

               Conread position:
               493-652
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               153, 30
               

               Conread position:
               499-619
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 0
               
Show alignments to all cow chromosomes.