Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8068J22.3
        

               Conread position:
               168-407
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               101, 192
               

               Conread position:
               175-431
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               18, 240
               

               Conread position:
               184-407
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               184-561
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               266
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               32, 154
               

               Conread position:
               184-620
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 178
               

               Conread position:
               188-431
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               84, 182
               

               Conread position:
               188-644
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 147
               

               Conread position:
               189-376
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               74, 141
               

               Conread position:
               189-407
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               189-430
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               66, 217
               

               Conread position:
               189-619
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               190-612
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 33
               

               Conread position:
               191-411
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               191-431
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               82, 231
               

               Conread position:
               192-381
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 19
               

               Conread position:
               192-431
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               80, 58
               

               Conread position:
               192-454
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               80, 252
               

               Conread position:
               192-565
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 363
               

               Conread position:
               192-619
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 117
               

               Conread position:
               192-623
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 200
               

               Conread position:
               192-633
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 207
               

               Conread position:
               193-405
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               193-409
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               76, 218
               

               Conread position:
               193-459
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               78, 252
               

               Conread position:
               193-524
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 332
               

               Conread position:
               193-619
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 248
               

               Conread position:
               193-639
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 89
               

               Conread position:
               194-407
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               77, 148
               

               Conread position:
               194-658
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 159
               

               Conread position:
               195-407
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               195-618
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 165
               

               Conread position:
               203-572
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               70, 22
               

               Conread position:
               211-380
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               225-431
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               256-431
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               13, 112
               

               Conread position:
               272-619
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 67
               

               Conread position:
               277-628
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               321-691
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 41
               

               Conread position:
               347-619
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               353-619
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               127, 39
               

               Conread position:
               358-671
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 62
               

               Conread position:
               362-624
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               19, 96
               

               Conread position:
               365-622
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 113
               

               Conread position:
               367-619
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               376-619
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               23, 216
               

               Conread position:
               421-618
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               424-619
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               430-573
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               430-576
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               430-582
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               61, 100
               

               Conread position:
               430-618
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               48, 147
               

               Conread position:
               430-620
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               430-624
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               58, 163
               

               Conread position:
               431-621
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               50, 100
               

               Conread position:
               432-616
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 93
               

               Conread position:
               434-564
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               434-618
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               54, 139
               

               Conread position:
               434-618
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               434-619
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               434-689
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               51, 36
               

               Conread position:
               435-633
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               436-623
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               437-618
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               438-619
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 92
               

               Conread position:
               442-619
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               443-624
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               48, 5
               

               Conread position:
               448-629
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               32, 134
               

               Conread position:
               448-690
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               455-700
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               201, 29
               

               Conread position:
               461-620
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               464-626
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 142
               

               Conread position:
               472-619
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               481-621
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               483-623
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               489-619
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               493-619
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.