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Cow genome map

           
Conread name:
           
Ss1.1-Pla1-C0000032_A06.5
        

               
Conread position:
               
5-103
               

               
Cow position:
               
chr10:77620-77524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
6-110
               

               
Cow position:
               
chr10:14188419-14188526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
6-110
               

               
Cow position:
               
chr10:50182860-50182966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
7-554
               

               
Cow position:
               
chr10:6720229-6719689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
8-345
               

               
Cow position:
               
chr10:35619372-35619021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
14, 270
               

               
Conread position:
               
94-360
               

               
Cow position:
               
chr10:30121661-30121387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
98-559
               

               
Cow position:
               
chr10:22049508-22049035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
103-262
               

               
Cow position:
               
chr10:31933732-31933893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
104-263
               

               
Cow position:
               
chr10:8068343-8068189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
106-361
               

               
Cow position:
               
chr10:32128009-32127743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
117-359
               

               
Cow position:
               
chr10:61511405-61511163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
185, 20
               

               
Conread position:
               
122-247
               

               
Cow position:
               
chr10:51435611-51435489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
122-327
               

               
Cow position:
               
chr10:35979150-35978943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 133
               

               
Conread position:
               
123-311
               

               
Cow position:
               
chr10:60240013-60240189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
178, 20
               

               
Conread position:
               
123-345
               

               
Cow position:
               
chr10:7786991-7786766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
127-250
               

               
Cow position:
               
chr10:4198215-4198093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
127-559
               

               
Cow position:
               
chr10:7304778-7304353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
128-347
               

               
Cow position:
               
chr10:19402642-19402424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
128-359
               

               
Cow position:
               
chr10:4148698-4148472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
174, 24
               

               
Conread position:
               
128-360
               

               
Cow position:
               
chr10:59004571-59004329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
114, 40
               

               
Conread position:
               
128-557
               

               
Cow position:
               
chr10:11081180-11080742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
129-251
               

               
Cow position:
               
chr10:54630023-54629901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
28, 6
               

               
Conread position:
               
129-359
               

               
Cow position:
               
chr10:65461252-65461017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 136
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr10:67205344-67205134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
132-347
               

               
Cow position:
               
chr10:50051868-50052082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
170, 20
               

               
Conread position:
               
132-359
               

               
Cow position:
               
chr10:6932284-6932501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
170, 11
               

               
Conread position:
               
132-359
               

               
Cow position:
               
chr10:46266310-46266532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
133-342
               

               
Cow position:
               
chr10:32492262-32492050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
134-359
               

               
Cow position:
               
chr10:41408475-41408257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
21, 127
               

               
Conread position:
               
134-359
               

               
Cow position:
               
chr10:51284191-51283967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
135-251
               

               
Cow position:
               
chr10:30455600-30455717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
135-347
               

               
Cow position:
               
chr10:19394362-19394576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
117, 198
               

               
Conread position:
               
135-347
               

               
Cow position:
               
chr10:34603443-34603650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
135-369
               

               
Cow position:
               
chr10:42231008-42230765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 32
               

               
Conread position:
               
135-546
               

               
Cow position:
               
chr10:50390971-50390576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
135-558
               

               
Cow position:
               
chr10:42313111-42312691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
136-361
               

               
Cow position:
               
chr10:66320875-66321102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
137-285
               

               
Cow position:
               
chr10:33122377-33122525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
137-335
               

               
Cow position:
               
chr10:18013892-18013693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
165, 117
               

               
Conread position:
               
137-343
               

               
Cow position:
               
chr10:51879019-51879226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
27, 131
               

               
Conread position:
               
137-359
               

               
Cow position:
               
chr10:44863853-44863627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
137-546
               

               
Cow position:
               
chr10:45371256-45370850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
164, 5
               

               
Conread position:
               
137-559
               

               
Cow position:
               
chr10:8093121-8093533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
160, 95
               

               
Conread position:
               
138-271
               

               
Cow position:
               
chr10:50151346-50151479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 117
               

               
Conread position:
               
139-282
               

               
Cow position:
               
chr10:9355141-9355002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
139-333
               

               
Cow position:
               
chr10:52152997-52152803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
163, 75
               

               
Conread position:
               
139-342
               

               
Cow position:
               
chr10:49142307-49142508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
163, 28
               

               
Conread position:
               
139-359
               

               
Cow position:
               
chr10:33881579-33881801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
139-360
               

               
Cow position:
               
chr10:6516905-6516679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
31, 196
               

               
Conread position:
               
139-368
               

               
Cow position:
               
chr10:37795681-37795926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
140-347
               

               
Cow position:
               
chr10:61146747-61146538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
140-356
               

               
Cow position:
               
chr10:3286703-3286916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
140-359
               

               
Cow position:
               
chr10:27716637-27716858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
17, 115
               

               
Conread position:
               
140-483
               

               
Cow position:
               
chr10:41132461-41132129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 108
               

               
Conread position:
               
140-548
               

               
Cow position:
               
chr10:39387646-39387250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 14
               

               
Conread position:
               
140-558
               

               
Cow position:
               
chr10:43487914-43487494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
141-273
               

               
Cow position:
               
chr10:21427191-21427322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
141-346
               

               
Cow position:
               
chr10:10829240-10829038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
141-357
               

               
Cow position:
               
chr10:2899878-2899659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
141-370
               

               
Cow position:
               
chr10:43272842-43273073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
141-518
               

               
Cow position:
               
chr10:40107305-40106927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
142-330
               

               
Cow position:
               
chr10:61039317-61039130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
142-359
               

               
Cow position:
               
chr10:55078723-55078940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
160, 12
               

               
Conread position:
               
142-360
               

               
Cow position:
               
chr10:43586087-43586303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 95
               

               
Conread position:
               
142-370
               

               
Cow position:
               
chr10:26209036-26209276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
142-531
               

               
Cow position:
               
chr10:63884142-63883760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
85, 211
               

               
Conread position:
               
143-245
               

               
Cow position:
               
chr10:37973474-37973370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
143-285
               

               
Cow position:
               
chr10:30923101-30923236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
143-314
               

               
Cow position:
               
chr10:69937251-69937420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
159, 10
               

               
Conread position:
               
143-315
               

               
Cow position:
               
chr10:22960985-22961146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
143-315
               

               
Cow position:
               
chr10:32829431-32829258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
143-318
               

               
Cow position:
               
chr10:19709581-19709401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
143-345
               

               
Cow position:
               
chr10:6852458-6852258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
143-347
               

               
Cow position:
               
chr10:43459857-43460058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
143-355
               

               
Cow position:
               
chr10:39410993-39410793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
132, 19
               

               
Conread position:
               
143-359
               

               
Cow position:
               
chr10:33790132-33790348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
159, 9
               

               
Conread position:
               
143-361
               

               
Cow position:
               
chr10:47159400-47159195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
159, 8
               

               
Conread position:
               
143-361
               

               
Cow position:
               
chr10:48814231-48814447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
143-374
               

               
Cow position:
               
chr10:33195240-33195010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
159, 14
               

               
Conread position:
               
143-388
               

               
Cow position:
               
chr10:6237107-6237352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
143-397
               

               
Cow position:
               
chr10:44834370-44834116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
158, 18
               

               
Conread position:
               
143-407
               

               
Cow position:
               
chr10:16297152-16297417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
143-409
               

               
Cow position:
               
chr10:32358613-32358342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
158, 111
               

               
Conread position:
               
143-522
               

               
Cow position:
               
chr10:25699857-25699469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
143-523
               

               
Cow position:
               
chr10:24756605-24756232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
143-525
               

               
Cow position:
               
chr10:4184397-4184005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 8
               

               
Conread position:
               
143-555
               

               
Cow position:
               
chr10:31362024-31362425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
159, 24
               

               
Conread position:
               
143-559
               

               
Cow position:
               
chr10:10048870-10048464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
95, 12
               

               
Conread position:
               
143-559
               

               
Cow position:
               
chr10:19103984-19104394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 158
               

               
Conread position:
               
143-559
               

               
Cow position:
               
chr10:52296691-52296279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 15
               

               
Conread position:
               
144-290
               

               
Cow position:
               
chr10:26996892-26996747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
144-345
               

               
Cow position:
               
chr10:32649052-32649247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
18, 112
               

               
Conread position:
               
144-482
               

               
Cow position:
               
chr10:24004268-24004612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
158, 110
               

               
Conread position:
               
144-559
               

               
Cow position:
               
chr10:37989483-37989091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
219, 10
               

               
Conread position:
               
145-271
               

               
Cow position:
               
chr10:24072098-24072216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
145-297
               

               
Cow position:
               
chr10:49686936-49686791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
145-298
               

               
Cow position:
               
chr10:13363682-13363834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
145-326
               

               
Cow position:
               
chr10:37258670-37258853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
145-331
               

               
Cow position:
               
chr10:60353859-60354036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
145-335
               

               
Cow position:
               
chr10:20291074-20291267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
145-339
               

               
Cow position:
               
chr10:60955319-60955513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
157, 22
               

               
Conread position:
               
145-345
               

               
Cow position:
               
chr10:9959412-9959212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 109
               

               
Conread position:
               
145-347
               

               
Cow position:
               
chr10:19503086-19503289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 87
               

               
Conread position:
               
145-357
               

               
Cow position:
               
chr10:25968360-25968152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
157, 56
               

               
Conread position:
               
145-358
               

               
Cow position:
               
chr10:29373177-29373391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
145-359
               

               
Cow position:
               
chr10:46228877-46228671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
157, 13
               

               
Conread position:
               
145-360
               

               
Cow position:
               
chr10:39140502-39140301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
157, 53
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr10:8847365-8847139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr10:17567910-17568121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr10:44513067-44513282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr10:58638199-58637994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 51
               

               
Conread position:
               
145-370
               

               
Cow position:
               
chr10:60491071-60491293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
145-522
               

               
Cow position:
               
chr10:4109773-4109409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
14, 96
               

               
Conread position:
               
145-554
               

               
Cow position:
               
chr10:69934589-69934990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 53
               

               
Conread position:
               
145-557
               

               
Cow position:
               
chr10:63940964-63940559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
145-558
               

               
Cow position:
               
chr10:37014830-37014419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 62
               

               
Conread position:
               
145-559
               

               
Cow position:
               
chr10:26009-25611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
157, 42
               

               
Conread position:
               
145-559
               

               
Cow position:
               
chr10:7366599-7367007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
145-559
               

               
Cow position:
               
chr10:10751793-10752198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 109
               

               
Conread position:
               
145-559
               

               
Cow position:
               
chr10:13311941-13311514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 198
               

               
Conread position:
               
146-294
               

               
Cow position:
               
chr10:35717079-35717226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
146-308
               

               
Cow position:
               
chr10:35820145-35820302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
146-333
               

               
Cow position:
               
chr10:17518653-17518839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
156, 21
               

               
Conread position:
               
146-345
               

               
Cow position:
               
chr10:16414384-16414578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
155, 16
               

               
Conread position:
               
146-345
               

               
Cow position:
               
chr10:36399853-36400054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 115
               

               
Conread position:
               
146-345
               

               
Cow position:
               
chr10:36400888-36401089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 115
               

               
Conread position:
               
146-359
               

               
Cow position:
               
chr10:48679073-48679284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
146-370
               

               
Cow position:
               
chr10:64227583-64227363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 154
               

               
Conread position:
               
146-389
               

               
Cow position:
               
chr10:3533748-3533992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
146-544
               

               
Cow position:
               
chr10:8161699-8161301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
156, 114
               

               
Conread position:
               
146-559
               

               
Cow position:
               
chr10:28721972-28721572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
147-346
               

               
Cow position:
               
chr10:38205522-38205715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
147-347
               

               
Cow position:
               
chr10:13364874-13365061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
147-360
               

               
Cow position:
               
chr10:31528159-31527956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
147-370
               

               
Cow position:
               
chr10:6664221-6664005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
155, 15
               

               
Conread position:
               
147-370
               

               
Cow position:
               
chr10:52125500-52125713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
147-546
               

               
Cow position:
               
chr10:34607756-34607353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 107
               

               
Conread position:
               
148-279
               

               
Cow position:
               
chr10:33574271-33574399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
148-332
               

               
Cow position:
               
chr10:33573055-33573237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 93
               

               
Conread position:
               
148-361
               

               
Cow position:
               
chr10:59247597-59247385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
172, 113
               

               
Conread position:
               
148-370
               

               
Cow position:
               
chr10:2535752-2535543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
153, 19
               

               
Conread position:
               
148-495
               

               
Cow position:
               
chr10:16986526-16986173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 105
               

               
Conread position:
               
148-558
               

               
Cow position:
               
chr10:35904657-35905045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
168, 10
               

               
Conread position:
               
148-559
               

               
Cow position:
               
chr10:38942631-38942208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
12, 111
               

               
Conread position:
               
149-360
               

               
Cow position:
               
chr10:49923174-49923392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
19, 5
               

               
Conread position:
               
149-370
               

               
Cow position:
               
chr10:56996521-56996737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
153, 82
               

               
Conread position:
               
149-554
               

               
Cow position:
               
chr10:45871708-45871300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr10:63484826-63484621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
152, 83
               

               
Conread position:
               
150-370
               

               
Cow position:
               
chr10:35605232-35605021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
150-554
               

               
Cow position:
               
chr10:15889671-15889273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
90, 108
               

               
Conread position:
               
150-558
               

               
Cow position:
               
chr10:13764975-13765381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
151, 95
               

               
Conread position:
               
150-559
               

               
Cow position:
               
chr10:20371943-20372349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 109
               

               
Conread position:
               
150-559
               

               
Cow position:
               
chr10:24753325-24752938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
152, 67
               

               
Conread position:
               
150-559
               

               
Cow position:
               
chr10:38370263-38370680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 104
               

               
Conread position:
               
151-253
               

               
Cow position:
               
chr10:39121714-39121816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
151-253
               

               
Cow position:
               
chr10:53696295-53696193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
151-256
               

               
Cow position:
               
chr10:42467551-42467446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
151-289
               

               
Cow position:
               
chr10:28707081-28706951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
151-305
               

               
Cow position:
               
chr10:662120-661965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 16
               

               
Conread position:
               
151-309
               

               
Cow position:
               
chr10:26750543-26750389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
124, 87
               

               
Conread position:
               
151-320
               

               
Cow position:
               
chr10:35820428-35820598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
151, 103
               

               
Conread position:
               
151-323
               

               
Cow position:
               
chr10:4485179-4485011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
151, 16
               

               
Conread position:
               
151-325
               

               
Cow position:
               
chr10:47430011-47429841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
147, 80
               

               
Conread position:
               
151-326
               

               
Cow position:
               
chr10:18011369-18011192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
151-327
               

               
Cow position:
               
chr10:4329804-4329983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
151-336
               

               
Cow position:
               
chr10:16641742-16641926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
134, 85
               

               
Conread position:
               
151-338
               

               
Cow position:
               
chr10:52168932-52169124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
151-341
               

               
Cow position:
               
chr10:32336209-32336019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
151, 108
               

               
Conread position:
               
151-341
               

               
Cow position:
               
chr10:40999044-40998857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
150, 11
               

               
Conread position:
               
151-342
               

               
Cow position:
               
chr10:31626150-31625958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
151, 103
               

               
Conread position:
               
151-343
               

               
Cow position:
               
chr10:8476528-8476335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
151, 103
               

               
Conread position:
               
151-343
               

               
Cow position:
               
chr10:21528980-21528786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 44
               

               
Conread position:
               
151-343
               

               
Cow position:
               
chr10:21546354-21546160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 44
               

               
Conread position:
               
151-344
               

               
Cow position:
               
chr10:15601990-15602184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 103
               

               
Conread position:
               
151-345
               

               
Cow position:
               
chr10:9797724-9797914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 50
               

               
Conread position:
               
151-346
               

               
Cow position:
               
chr10:17616095-17616290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 104
               

               
Conread position:
               
151-347
               

               
Cow position:
               
chr10:41676229-41676415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 18
               

               
Conread position:
               
151-347
               

               
Cow position:
               
chr10:57095019-57095206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
151-354
               

               
Cow position:
               
chr10:11060345-11060540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
151-355
               

               
Cow position:
               
chr10:4621347-4621142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
150, 109
               

               
Conread position:
               
151-358
               

               
Cow position:
               
chr10:43918440-43918234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
151, 42
               

               
Conread position:
               
151-359
               

               
Cow position:
               
chr10:11059945-11059738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
151, 53
               

               
Conread position:
               
151-359
               

               
Cow position:
               
chr10:22774606-22774810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
151, 79
               

               
Conread position:
               
151-359
               

               
Cow position:
               
chr10:67379484-67379278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
151, 103
               

               
Conread position:
               
151-360
               

               
Cow position:
               
chr10:14358512-14358305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
151, 103
               

               
Conread position:
               
151-360
               

               
Cow position:
               
chr10:14622571-14622358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
116, 108
               

               
Conread position:
               
151-361
               

               
Cow position:
               
chr10:23379317-23379114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
151, 55
               

               
Conread position:
               
151-361
               

               
Cow position:
               
chr10:35248953-35249154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
151-361
               

               
Cow position:
               
chr10:40147439-40147653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
8, 112
               

               
Conread position:
               
151-367
               

               
Cow position:
               
chr10:58642120-58642335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
151, 102
               

               
Conread position:
               
151-370
               

               
Cow position:
               
chr10:6174118-6174321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
151-370
               

               
Cow position:
               
chr10:38995421-38995200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
151-371
               

               
Cow position:
               
chr10:62454177-62454399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
151-376
               

               
Cow position:
               
chr10:35017926-35017687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
86, 105
               

               
Conread position:
               
151-391
               

               
Cow position:
               
chr10:6569459-6569704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 107
               

               
Conread position:
               
151-406
               

               
Cow position:
               
chr10:63464-63720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
151-490
               

               
Cow position:
               
chr10:42123402-42123746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
148, 26
               

               
Conread position:
               
151-524
               

               
Cow position:
               
chr10:69048855-69049235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
151, 103
               

               
Conread position:
               
151-532
               

               
Cow position:
               
chr10:35653856-35653469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 125
               

               
Conread position:
               
151-546
               

               
Cow position:
               
chr10:22341762-22341360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
151-547
               

               
Cow position:
               
chr10:11009607-11009216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
82, 246
               

               
Conread position:
               
151-548
               

               
Cow position:
               
chr10:50332780-50332379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 17
               

               
Conread position:
               
151-551
               

               
Cow position:
               
chr10:14947440-14947056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
151-551
               

               
Cow position:
               
chr10:25150074-25149689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 98
               

               
Conread position:
               
151-554
               

               
Cow position:
               
chr10:29361120-29360695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
151-555
               

               
Cow position:
               
chr10:37765224-37764803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
151, 16
               

               
Conread position:
               
151-558
               

               
Cow position:
               
chr10:16644999-16645411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 54
               

               
Conread position:
               
151-558
               

               
Cow position:
               
chr10:19403101-19402718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 104
               

               
Conread position:
               
151-559
               

               
Cow position:
               
chr10:13368545-13368133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
87, 104
               

               
Conread position:
               
151-559
               

               
Cow position:
               
chr10:19895582-19895181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 76
               

               
Conread position:
               
151-559
               

               
Cow position:
               
chr10:25936427-25936026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 107
               

               
Conread position:
               
151-559
               

               
Cow position:
               
chr10:56733216-56732828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
326, 51
               

               
Conread position:
               
151-577
               

               
Cow position:
               
chr10:33666030-33665605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
147, 86
               

               
Conread position:
               
152-558
               

               
Cow position:
               
chr10:22508991-22509401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
150, 10
               

               
Conread position:
               
153-326
               

               
Cow position:
               
chr10:24035834-24036006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
148, 9
               

               
Conread position:
               
153-335
               

               
Cow position:
               
chr10:10617178-10616995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
149, 101
               

               
Conread position:
               
153-389
               

               
Cow position:
               
chr10:10138047-10137816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
153-557
               

               
Cow position:
               
chr10:57033611-57034006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
154, 101
               

               
Conread position:
               
154-295
               

               
Cow position:
               
chr10:42077190-42077049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
154-320
               

               
Cow position:
               
chr10:15570071-15569904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
147, 100
               

               
Conread position:
               
154-335
               

               
Cow position:
               
chr10:10476519-10476690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
144, 42
               

               
Conread position:
               
154-341
               

               
Cow position:
               
chr10:41618295-41618481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
148, 100
               

               
Conread position:
               
154-347
               

               
Cow position:
               
chr10:51691063-51690876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
154-356
               

               
Cow position:
               
chr10:5014128-5014314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
154-357
               

               
Cow position:
               
chr10:34903656-34903463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
144, 15
               

               
Conread position:
               
154-359
               

               
Cow position:
               
chr10:59424786-59424581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
154-360
               

               
Cow position:
               
chr10:17077557-17077756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
144, 33
               

               
Conread position:
               
154-360
               

               
Cow position:
               
chr10:35715401-35715617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
154-370
               

               
Cow position:
               
chr10:19099014-19098812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
144, 67
               

               
Conread position:
               
154-520
               

               
Cow position:
               
chr10:42637414-42637038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
145, 36
               

               
Conread position:
               
154-533
               

               
Cow position:
               
chr10:37534774-37534410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
154-557
               

               
Cow position:
               
chr10:15868440-15868019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 100
               

               
Conread position:
               
155-310
               

               
Cow position:
               
chr10:58066004-58066158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
155-339
               

               
Cow position:
               
chr10:61171443-61171260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
155-346
               

               
Cow position:
               
chr10:30369644-30369827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
143, 12
               

               
Conread position:
               
155-359
               

               
Cow position:
               
chr10:46043178-46042976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
155-361
               

               
Cow position:
               
chr10:9656341-9656542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
147, 76
               

               
Conread position:
               
155-368
               

               
Cow position:
               
chr10:57877658-57877444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
155-370
               

               
Cow position:
               
chr10:46934594-46934811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 99
               

               
Conread position:
               
155-374
               

               
Cow position:
               
chr10:18611707-18611492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
147, 17
               

               
Conread position:
               
155-544
               

               
Cow position:
               
chr10:45658323-45657939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
143, 50
               

               
Conread position:
               
155-546
               

               
Cow position:
               
chr10:33215976-33215591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
227, 58
               

               
Conread position:
               
155-555
               

               
Cow position:
               
chr10:54848961-54848563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
155-557
               

               
Cow position:
               
chr10:44730291-44730697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 12
               

               
Conread position:
               
155-558
               

               
Cow position:
               
chr10:31400717-31401115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 7
               

               
Conread position:
               
155-558
               

               
Cow position:
               
chr10:54504785-54504385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
127, 14
               

               
Conread position:
               
155-559
               

               
Cow position:
               
chr10:23576724-23576325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
146, 78
               

               
Conread position:
               
156-282
               

               
Cow position:
               
chr10:22359659-22359791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
89, 6
               

               
Conread position:
               
156-283
               

               
Cow position:
               
chr10:5265469-5265345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
156-346
               

               
Cow position:
               
chr10:38386045-38386243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
85, 183
               

               
Conread position:
               
156-409
               

               
Cow position:
               
chr10:23912329-23912584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
145, 40
               

               
Conread position:
               
156-525
               

               
Cow position:
               
chr10:21082552-21082198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
145, 12
               

               
Conread position:
               
156-525
               

               
Cow position:
               
chr10:59009957-59010327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
145, 11
               

               
Conread position:
               
157-315
               

               
Cow position:
               
chr10:56303755-56303597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
142, 94
               

               
Conread position:
               
157-360
               

               
Cow position:
               
chr10:48353760-48353953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
157-370
               

               
Cow position:
               
chr10:24830891-24831112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
158-242
               

               
Cow position:
               
chr10:13166595-13166511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
85
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
158-253
               

               
Cow position:
               
chr10:40595607-40595512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
158-263
               

               
Cow position:
               
chr10:30452012-30451906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
158-276
               

               
Cow position:
               
chr10:1072910-1073026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
158-276
               

               
Cow position:
               
chr10:27118784-27118895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
158-277
               

               
Cow position:
               
chr10:38156527-38156640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
158-284
               

               
Cow position:
               
chr10:52364978-52364852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
158-285
               

               
Cow position:
               
chr10:55194575-55194696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
158-295
               

               
Cow position:
               
chr10:69973774-69973910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
158-296
               

               
Cow position:
               
chr10:55270835-55270972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 81
               

               
Conread position:
               
158-297
               

               
Cow position:
               
chr10:17984065-17983927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
158-297
               

               
Cow position:
               
chr10:54263406-54263268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
158-297
               

               
Cow position:
               
chr10:55013559-55013421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
158-300
               

               
Cow position:
               
chr10:35772620-35772761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
158-300
               

               
Cow position:
               
chr10:58606534-58606394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
158-300
               

               
Cow position:
               
chr10:66940658-66940800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
158-314
               

               
Cow position:
               
chr10:5108671-5108828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
144, 102
               

               
Conread position:
               
158-314
               

               
Cow position:
               
chr10:14668580-14668425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
158-314
               

               
Cow position:
               
chr10:47673126-47673290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
158-315
               

               
Cow position:
               
chr10:63312553-63312719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
158-320
               

               
Cow position:
               
chr10:8891106-8891268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
158-320
               

               
Cow position:
               
chr10:30801503-30801340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
144, 102
               

               
Conread position:
               
158-325
               

               
Cow position:
               
chr10:53808206-53808373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
144, 96
               

               
Conread position:
               
158-335
               

               
Cow position:
               
chr10:44542-44718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
144, 29
               

               
Conread position:
               
158-337
               

               
Cow position:
               
chr10:12960119-12960296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
144, 37
               

               
Conread position:
               
158-338
               

               
Cow position:
               
chr10:35858847-35858681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
158-339
               

               
Cow position:
               
chr10:68572539-68572360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
158-340
               

               
Cow position:
               
chr10:8870997-8870816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
144, 15
               

               
Conread position:
               
158-342
               

               
Cow position:
               
chr10:30836852-30837037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
143, 10
               

               
Conread position:
               
158-343
               

               
Cow position:
               
chr10:4143058-4143243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
144, 96
               

               
Conread position:
               
158-343
               

               
Cow position:
               
chr10:7309268-7309454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
144, 96
               

               
Conread position:
               
158-343
               

               
Cow position:
               
chr10:52895859-52896046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
158-344
               

               
Cow position:
               
chr10:58835960-58836146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
144, 9
               

               
Conread position:
               
158-345
               

               
Cow position:
               
chr10:31534919-31534730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
143, 90
               

               
Conread position:
               
158-345
               

               
Cow position:
               
chr10:35486252-35486442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
158-345
               

               
Cow position:
               
chr10:40125062-40125248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
140, 10
               

               
Conread position:
               
158-345
               

               
Cow position:
               
chr10:49902755-49902571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
158-345
               

               
Cow position:
               
chr10:55960689-55960509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
144, 43
               

               
Conread position:
               
158-345
               

               
Cow position:
               
chr10:56136686-56136498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
144, 102
               

               
Conread position:
               
158-346
               

               
Cow position:
               
chr10:46171853-46172044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
158-346
               

               
Cow position:
               
chr10:62919309-62919497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
144, 96
               

               
Conread position:
               
158-347
               

               
Cow position:
               
chr10:2328372-2328183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
158-347
               

               
Cow position:
               
chr10:22937938-22937748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
143, 104
               

               
Conread position:
               
158-347
               

               
Cow position:
               
chr10:25822073-25822248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
158-347
               

               
Cow position:
               
chr10:28843540-28843352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
144, 9
               

               
Conread position:
               
158-347
               

               
Cow position:
               
chr10:37375565-37375754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
136, 10
               

               
Conread position:
               
158-347
               

               
Cow position:
               
chr10:43201165-43201354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
144, 113
               

               
Conread position:
               
158-347
               

               
Cow position:
               
chr10:50042799-50042597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
158-347
               

               
Cow position:
               
chr10:53945188-53944998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
144, 96
               

               
Conread position:
               
158-347
               

               
Cow position:
               
chr10:59417057-59417241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
143, 86
               

               
Conread position:
               
158-347
               

               
Cow position:
               
chr10:65681527-65681714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
144, 102
               

               
Conread position:
               
158-348
               

               
Cow position:
               
chr10:5465621-5465814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
158-348
               

               
Cow position:
               
chr10:53698590-53698400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
147, 9
               

               
Conread position:
               
158-350
               

               
Cow position:
               
chr10:3986072-3985881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
158-351
               

               
Cow position:
               
chr10:5608136-5607941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
141, 67
               

               
Conread position:
               
158-354
               

               
Cow position:
               
chr10:17304188-17304377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
158-355
               

               
Cow position:
               
chr10:32412061-32411864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
144, 37
               

               
Conread position:
               
158-355
               

               
Cow position:
               
chr10:34705459-34705263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
144, 9
               

               
Conread position:
               
158-355
               

               
Cow position:
               
chr10:46876221-46876024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
144, 64
               

               
Conread position:
               
158-355
               

               
Cow position:
               
chr10:62211692-62211490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
158-357
               

               
Cow position:
               
chr10:10488579-10488772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
158-358
               

               
Cow position:
               
chr10:46850048-46849847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
144, 96
               

               
Conread position:
               
158-358
               

               
Cow position:
               
chr10:55382497-55382298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
144, 9
               

               
Conread position:
               
158-359
               

               
Cow position:
               
chr10:8536624-8536826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
144, 96
               

               
Conread position:
               
158-359
               

               
Cow position:
               
chr10:8811768-8811973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 99
               

               
Conread position:
               
158-359
               

               
Cow position:
               
chr10:11281980-11282186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
144, 96
               

               
Conread position:
               
158-359
               

               
Cow position:
               
chr10:17728152-17727954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
144, 40
               

               
Conread position:
               
158-359
               

               
Cow position:
               
chr10:26829625-26829827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
144, 96
               

               
Conread position:
               
158-359
               

               
Cow position:
               
chr10:36915331-36915524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
144, 42
               

               
Conread position:
               
158-359
               

               
Cow position:
               
chr10:38800021-38799826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
144, 26
               

               
Conread position:
               
158-359
               

               
Cow position:
               
chr10:45337864-45337662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
144, 105
               

               
Conread position:
               
158-359
               

               
Cow position:
               
chr10:49942653-49942451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
144, 96
               

               
Conread position:
               
158-359
               

               
Cow position:
               
chr10:62118724-62118927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
158-359
               

               
Cow position:
               
chr10:63002537-63002336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
144, 19
               

               
Conread position:
               
158-360
               

               
Cow position:
               
chr10:10153185-10152991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
144, 9
               

               
Conread position:
               
158-360
               

               
Cow position:
               
chr10:23310844-23311046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 92
               

               
Conread position:
               
158-360
               

               
Cow position:
               
chr10:23478758-23478954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
158-360
               

               
Cow position:
               
chr10:24296011-24296216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
114, 10
               

               
Conread position:
               
158-360
               

               
Cow position:
               
chr10:38195794-38195993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
143, 10
               

               
Conread position:
               
158-360
               

               
Cow position:
               
chr10:49862645-49862451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
158-360
               

               
Cow position:
               
chr10:52072758-52072953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
144, 68
               

               
Conread position:
               
158-360
               

               
Cow position:
               
chr10:52881436-52881637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 37
               

               
Conread position:
               
158-360
               

               
Cow position:
               
chr10:64877526-64877730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
94, 76
               

               
Conread position:
               
158-361
               

               
Cow position:
               
chr10:24915538-24915738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
144, 80
               

               
Conread position:
               
158-361
               

               
Cow position:
               
chr10:29558609-29558813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
158-361
               

               
Cow position:
               
chr10:31718200-31718403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
144, 101
               

               
Conread position:
               
158-361
               

               
Cow position:
               
chr10:37563781-37563585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
158-361
               

               
Cow position:
               
chr10:37822415-37822629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
158-361
               

               
Cow position:
               
chr10:38421457-38421670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 152
               

               
Conread position:
               
158-364
               

               
Cow position:
               
chr10:46319160-46318954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
144, 96
               

               
Conread position:
               
158-364
               

               
Cow position:
               
chr10:50050079-50049882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
144, 43
               

               
Conread position:
               
158-367
               

               
Cow position:
               
chr10:59203790-59203584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
196, 10
               

               
Conread position:
               
158-370
               

               
Cow position:
               
chr10:14093069-14093271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
158-370
               

               
Cow position:
               
chr10:27178667-27178467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 35
               

               
Conread position:
               
158-370
               

               
Cow position:
               
chr10:31004834-31005044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 139
               

               
Conread position:
               
158-370
               

               
Cow position:
               
chr10:46327871-46327662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
140, 82
               

               
Conread position:
               
158-370
               

               
Cow position:
               
chr10:48316763-48316975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 95
               

               
Conread position:
               
158-370
               

               
Cow position:
               
chr10:48377214-48377426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 96
               

               
Conread position:
               
158-370
               

               
Cow position:
               
chr10:50558748-50558953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
5, 56
               

               
Conread position:
               
158-370
               

               
Cow position:
               
chr10:60962615-60962389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
158-370
               

               
Cow position:
               
chr10:61509768-61509973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
140, 11
               

               
Conread position:
               
158-376
               

               
Cow position:
               
chr10:66365485-66365259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
158-389
               

               
Cow position:
               
chr10:65582628-65582397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
158-390
               

               
Cow position:
               
chr10:8853731-8853503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
142, 61
               

               
Conread position:
               
158-390
               

               
Cow position:
               
chr10:9309389-9309169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
158-392
               

               
Cow position:
               
chr10:49224098-49223862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
144, 47
               

               
Conread position:
               
158-393
               

               
Cow position:
               
chr10:22980799-22981030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
144, 71
               

               
Conread position:
               
158-406
               

               
Cow position:
               
chr10:10219828-10219568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
158-406
               

               
Cow position:
               
chr10:35981773-35981520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
144, 93
               

               
Conread position:
               
158-408
               

               
Cow position:
               
chr10:46151049-46150795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
144, 74
               

               
Conread position:
               
158-409
               

               
Cow position:
               
chr10:33084248-33084520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
158-420
               

               
Cow position:
               
chr10:53706806-53706541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
158-501
               

               
Cow position:
               
chr10:2201954-2202287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
155, 37
               

               
Conread position:
               
158-512
               

               
Cow position:
               
chr10:60236919-60237267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
143, 90
               

               
Conread position:
               
158-518
               

               
Cow position:
               
chr10:39228342-39227966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
158-522
               

               
Cow position:
               
chr10:11463479-11463850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 208
               

               
Conread position:
               
158-533
               

               
Cow position:
               
chr10:19372153-19372529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
158-533
               

               
Cow position:
               
chr10:30787444-30787809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 98
               

               
Conread position:
               
158-540
               

               
Cow position:
               
chr10:45476039-45476417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
144, 17
               

               
Conread position:
               
158-546
               

               
Cow position:
               
chr10:48257095-48257485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 60
               

               
Conread position:
               
158-549
               

               
Cow position:
               
chr10:48259064-48259441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
205, 96
               

               
Conread position:
               
158-554
               

               
Cow position:
               
chr10:12392424-12392815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
158-555
               

               
Cow position:
               
chr10:7291634-7292010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
144, 40
               

               
Conread position:
               
158-557
               

               
Cow position:
               
chr10:16598872-16598473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 100
               

               
Conread position:
               
158-557
               

               
Cow position:
               
chr10:50109718-50110120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
158-558
               

               
Cow position:
               
chr10:13586883-13586497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
158-558
               

               
Cow position:
               
chr10:15817619-15818013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
158-558
               

               
Cow position:
               
chr10:31027461-31027861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
158-558
               

               
Cow position:
               
chr10:44771827-44771439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 11
               

               
Conread position:
               
158-558
               

               
Cow position:
               
chr10:61588076-61588478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
144, 102
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr10:318524-318912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
205, 96
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr10:11966664-11967063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr10:16739892-16740275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
143, 44
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr10:22390777-22390371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr10:24312711-24313107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 88
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr10:29166461-29166060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
72, 258
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr10:35792108-35791715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr10:36490199-36489801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr10:41737472-41737088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 37
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr10:45378821-45379226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 10
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr10:52569776-52569374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 96
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr10:56079980-56080392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 77
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr10:57059094-57059503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 9
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr10:57786516-57786119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
140, 9
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr10:62220021-62219606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
158-561
               

               
Cow position:
               
chr10:47690577-47690174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
84, 10
               

               
Conread position:
               
158-568
               

               
Cow position:
               
chr10:64042264-64041855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
143, 10
               

               
Conread position:
               
159-279
               

               
Cow position:
               
chr10:6486609-6486492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
159-290
               

               
Cow position:
               
chr10:36813543-36813673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
159-296
               

               
Cow position:
               
chr10:42574209-42574067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
159-301
               

               
Cow position:
               
chr10:64864048-64863907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
159-308
               

               
Cow position:
               
chr10:36945619-36945767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
159-311
               

               
Cow position:
               
chr10:11569821-11569665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 104
               

               
Conread position:
               
159-314
               

               
Cow position:
               
chr10:18849703-18849550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
143, 73
               

               
Conread position:
               
159-315
               

               
Cow position:
               
chr10:27328295-27328451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
143, 50
               

               
Conread position:
               
159-320
               

               
Cow position:
               
chr10:25475712-25475554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
139, 79
               

               
Conread position:
               
159-320
               

               
Cow position:
               
chr10:53766525-53766363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
159-327
               

               
Cow position:
               
chr10:5599819-5599989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 102
               

               
Conread position:
               
159-344
               

               
Cow position:
               
chr10:1698561-1698747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 104
               

               
Conread position:
               
159-345
               

               
Cow position:
               
chr10:4626705-4626520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
159-345
               

               
Cow position:
               
chr10:43441927-43442109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
159-345
               

               
Cow position:
               
chr10:45168911-45169095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
159-346
               

               
Cow position:
               
chr10:24971152-24971331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
142, 9
               

               
Conread position:
               
159-346
               

               
Cow position:
               
chr10:55069386-55069204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
139, 77
               

               
Conread position:
               
159-346
               

               
Cow position:
               
chr10:60697449-60697628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
142, 77
               

               
Conread position:
               
159-347
               

               
Cow position:
               
chr10:9575869-9576054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
142, 79
               

               
Conread position:
               
159-347
               

               
Cow position:
               
chr10:38218782-38218594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
142, 95
               

               
Conread position:
               
159-347
               

               
Cow position:
               
chr10:52003087-52003276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
159-348
               

               
Cow position:
               
chr10:33772630-33772441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
159-350
               

               
Cow position:
               
chr10:55577507-55577316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
159-360
               

               
Cow position:
               
chr10:6719157-6718955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
142, 95
               

               
Conread position:
               
159-360
               

               
Cow position:
               
chr10:20485380-20485578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
142, 65
               

               
Conread position:
               
159-361
               

               
Cow position:
               
chr10:19539645-19539842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
159-361
               

               
Cow position:
               
chr10:28223396-28223194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
159-363
               

               
Cow position:
               
chr10:53563937-53564142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
159-367
               

               
Cow position:
               
chr10:36531545-36531756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
159-367
               

               
Cow position:
               
chr10:54548682-54548486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
204, 66
               

               
Conread position:
               
159-370
               

               
Cow position:
               
chr10:55395799-55396005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
135, 72
               

               
Conread position:
               
159-380
               

               
Cow position:
               
chr10:35090232-35090010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
159-390
               

               
Cow position:
               
chr10:10027754-10027526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
142, 112
               

               
Conread position:
               
159-391
               

               
Cow position:
               
chr10:23346128-23346352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
142, 9
               

               
Conread position:
               
159-407
               

               
Cow position:
               
chr10:51803867-51804118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
143, 89
               

               
Conread position:
               
159-409
               

               
Cow position:
               
chr10:14396477-14396727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
143, 36
               

               
Conread position:
               
159-534
               

               
Cow position:
               
chr10:63276569-63276193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 32
               

               
Conread position:
               
159-540
               

               
Cow position:
               
chr10:40738170-40737800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 75
               

               
Conread position:
               
159-542
               

               
Cow position:
               
chr10:22594100-22593749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
159-557
               

               
Cow position:
               
chr10:25342762-25342376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
204, 75
               

               
Conread position:
               
159-559
               

               
Cow position:
               
chr10:14816981-14817383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 101
               

               
Conread position:
               
159-559
               

               
Cow position:
               
chr10:24096185-24096597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
159-559
               

               
Cow position:
               
chr10:29188168-29188579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
159-559
               

               
Cow position:
               
chr10:35862052-35862448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 28
               

               
Conread position:
               
159-559
               

               
Cow position:
               
chr10:38944439-38944041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
159-559
               

               
Cow position:
               
chr10:65071501-65071093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 8
               

               
Conread position:
               
160-285
               

               
Cow position:
               
chr10:43909668-43909792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
160-300
               

               
Cow position:
               
chr10:35720291-35720152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
160-343
               

               
Cow position:
               
chr10:56835472-56835288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
142, 94
               

               
Conread position:
               
160-359
               

               
Cow position:
               
chr10:63675053-63675253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
142, 100
               

               
Conread position:
               
160-361
               

               
Cow position:
               
chr10:44758987-44758789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
142, 98
               

               
Conread position:
               
160-361
               

               
Cow position:
               
chr10:48228671-48228874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
160-554
               

               
Cow position:
               
chr10:67442942-67443318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
232, 80
               

               
Conread position:
               
160-558
               

               
Cow position:
               
chr10:6490056-6489649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
160-559
               

               
Cow position:
               
chr10:37512061-37512466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
142, 36
               

               
Conread position:
               
161-305
               

               
Cow position:
               
chr10:27262296-27262438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
68, 40
               

               
Conread position:
               
161-337
               

               
Cow position:
               
chr10:17065825-17065650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
161-340
               

               
Cow position:
               
chr10:40933941-40933763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 23
               

               
Conread position:
               
161-344
               

               
Cow position:
               
chr10:22972826-22973008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
140, 87
               

               
Conread position:
               
161-345
               

               
Cow position:
               
chr10:29831299-29831474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
153, 30
               

               
Conread position:
               
161-347
               

               
Cow position:
               
chr10:13384345-13384150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 178
               

               
Conread position:
               
161-347
               

               
Cow position:
               
chr10:39930562-39930749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 99
               

               
Conread position:
               
161-357
               

               
Cow position:
               
chr10:39377942-39377748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
134, 16
               

               
Conread position:
               
161-359
               

               
Cow position:
               
chr10:25509858-25509657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 96
               

               
Conread position:
               
161-359
               

               
Cow position:
               
chr10:29627785-29627980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
141, 92
               

               
Conread position:
               
161-359
               

               
Cow position:
               
chr10:62316747-62316543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
161-360
               

               
Cow position:
               
chr10:20445310-20445110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
161-370
               

               
Cow position:
               
chr10:19191931-19191731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
137, 79
               

               
Conread position:
               
161-370
               

               
Cow position:
               
chr10:39258313-39258524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
114, 93
               

               
Conread position:
               
161-370
               

               
Cow position:
               
chr10:43676293-43676516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
99, 44
               

               
Conread position:
               
161-536
               

               
Cow position:
               
chr10:17073189-17073557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
141, 70
               

               
Conread position:
               
161-546
               

               
Cow position:
               
chr10:66128028-66127653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
139, 40
               

               
Conread position:
               
161-557
               

               
Cow position:
               
chr10:24560811-24561204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 90
               

               
Conread position:
               
161-559
               

               
Cow position:
               
chr10:41397653-41397262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
141, 93
               

               
Conread position:
               
161-559
               

               
Cow position:
               
chr10:54935949-54936330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
141, 106
               

               
Conread position:
               
162-246
               

               
Cow position:
               
chr10:59252733-59252817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
85
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
162-257
               

               
Cow position:
               
chr10:37065058-37065151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
162-258
               

               
Cow position:
               
chr10:52824996-52825092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
162-285
               

               
Cow position:
               
chr10:24548567-24548439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
162-294
               

               
Cow position:
               
chr10:2462302-2462430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
162-296
               

               
Cow position:
               
chr10:38293112-38292979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
162-305
               

               
Cow position:
               
chr10:847051-847198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
162-305
               

               
Cow position:
               
chr10:55235435-55235577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
137, 13
               

               
Conread position:
               
162-314
               

               
Cow position:
               
chr10:1255276-1255429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
41, 56
               

               
Conread position:
               
162-314
               

               
Cow position:
               
chr10:28571579-28571426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
140, 98
               

               
Conread position:
               
162-315
               

               
Cow position:
               
chr10:52574103-52574258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
132, 98
               

               
Conread position:
               
162-327
               

               
Cow position:
               
chr10:69621659-69621501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
162-332
               

               
Cow position:
               
chr10:38329822-38329652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
139, 88
               

               
Conread position:
               
162-336
               

               
Cow position:
               
chr10:18751298-18751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
162-342
               

               
Cow position:
               
chr10:63956132-63955957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
37, 6
               

               
Conread position:
               
162-347
               

               
Cow position:
               
chr10:57500539-57500353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
140, 92
               

               
Conread position:
               
162-347
               

               
Cow position:
               
chr10:64092581-64092767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 63
               

               
Conread position:
               
162-353
               

               
Cow position:
               
chr10:15383507-15383315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
140, 92
               

               
Conread position:
               
162-354
               

               
Cow position:
               
chr10:37708850-37709029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
139, 6
               

               
Conread position:
               
162-357
               

               
Cow position:
               
chr10:32929163-32928960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
162-360
               

               
Cow position:
               
chr10:32080444-32080256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
139, 78
               

               
Conread position:
               
162-361
               

               
Cow position:
               
chr10:3708314-3708104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
162-361
               

               
Cow position:
               
chr10:35795526-35795322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
162-370
               

               
Cow position:
               
chr10:55064070-55063862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
140, 39
               

               
Conread position:
               
162-406
               

               
Cow position:
               
chr10:30888692-30888939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
162-409
               

               
Cow position:
               
chr10:47543246-47542998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
136, 6
               

               
Conread position:
               
162-521
               

               
Cow position:
               
chr10:40163758-40164116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
140, 6
               

               
Conread position:
               
162-522
               

               
Cow position:
               
chr10:57461530-57461174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
139, 68
               

               
Conread position:
               
162-526
               

               
Cow position:
               
chr10:747648-747277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
140, 37
               

               
Conread position:
               
162-539
               

               
Cow position:
               
chr10:2973895-2974281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 206
               

               
Conread position:
               
162-557
               

               
Cow position:
               
chr10:5889581-5889986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
162-558
               

               
Cow position:
               
chr10:51306514-51306109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
162-558
               

               
Cow position:
               
chr10:64285624-64286013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
139, 7
               

               
Conread position:
               
162-559
               

               
Cow position:
               
chr10:1978496-1978881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
139, 6
               

               
Conread position:
               
162-559
               

               
Cow position:
               
chr10:6436234-6435841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
135, 69
               

               
Conread position:
               
162-559
               

               
Cow position:
               
chr10:22616464-22616861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 39
               

               
Conread position:
               
162-559
               

               
Cow position:
               
chr10:37286996-37287395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
219, 167
               

               
Conread position:
               
162-559
               

               
Cow position:
               
chr10:46830046-46829657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
140, 91
               

               
Conread position:
               
162-559
               

               
Cow position:
               
chr10:62286741-62286333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 6
               

               
Conread position:
               
162-560
               

               
Cow position:
               
chr10:17837130-17836730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
140, 29
               

               
Conread position:
               
162-572
               

               
Cow position:
               
chr10:51289420-51289023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
139, 6
               

               
Conread position:
               
163-287
               

               
Cow position:
               
chr10:5476985-5477108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
163-296
               

               
Cow position:
               
chr10:32440378-32440247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 86
               

               
Conread position:
               
163-300
               

               
Cow position:
               
chr10:48567779-48567641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
163-305
               

               
Cow position:
               
chr10:63757873-63758017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
163-310
               

               
Cow position:
               
chr10:49174154-49174302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 85
               

               
Conread position:
               
163-315
               

               
Cow position:
               
chr10:51280043-51279889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 98
               

               
Conread position:
               
163-330
               

               
Cow position:
               
chr10:23493513-23493674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
139, 64
               

               
Conread position:
               
163-345
               

               
Cow position:
               
chr10:37971938-37971765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
138, 30
               

               
Conread position:
               
163-346
               

               
Cow position:
               
chr10:14542048-14541866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
138, 64
               

               
Conread position:
               
163-346
               

               
Cow position:
               
chr10:42115531-42115355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
139, 72
               

               
Conread position:
               
163-347
               

               
Cow position:
               
chr10:37442739-37442537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
163-350
               

               
Cow position:
               
chr10:6964238-6964426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
139, 97
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr10:35637966-35638153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
139, 91
               

               
Conread position:
               
163-356
               

               
Cow position:
               
chr10:64140122-64140315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
139, 91
               

               
Conread position:
               
163-357
               

               
Cow position:
               
chr10:53429057-53428862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
139, 91
               

               
Conread position:
               
163-359
               

               
Cow position:
               
chr10:25466246-25466049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
139, 91
               

               
Conread position:
               
163-359
               

               
Cow position:
               
chr10:35473813-35473614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
163-360
               

               
Cow position:
               
chr10:4711776-4711581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
134, 97
               

               
Conread position:
               
163-361
               

               
Cow position:
               
chr10:5473722-5473922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
163-361
               

               
Cow position:
               
chr10:52062006-52061801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
163-371
               

               
Cow position:
               
chr10:65345289-65345504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
62, 5
               

               
Conread position:
               
163-505
               

               
Cow position:
               
chr10:38241256-38240917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
139, 67
               

               
Conread position:
               
163-524
               

               
Cow position:
               
chr10:49146683-49146338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
138, 33
               

               
Conread position:
               
163-540
               

               
Cow position:
               
chr10:43531443-43531055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
139, 79
               

               
Conread position:
               
163-559
               

               
Cow position:
               
chr10:49846951-49846558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 32
               

               
Conread position:
               
163-559
               

               
Cow position:
               
chr10:60961121-60960722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
91, 5
               

               
Conread position:
               
163-565
               

               
Cow position:
               
chr10:1976143-1976545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
164-296
               

               
Cow position:
               
chr10:38133139-38133004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
73, 94
               

               
Conread position:
               
164-310
               

               
Cow position:
               
chr10:25142361-25142506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 70
               

               
Conread position:
               
164-325
               

               
Cow position:
               
chr10:19238704-19238866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
138, 95
               

               
Conread position:
               
164-333
               

               
Cow position:
               
chr10:35731353-35731519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
134, 76
               

               
Conread position:
               
164-337
               

               
Cow position:
               
chr10:24861489-24861315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
111, 34
               

               
Conread position:
               
164-343
               

               
Cow position:
               
chr10:18154266-18154083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
125, 96
               

               
Conread position:
               
164-345
               

               
Cow position:
               
chr10:3957867-3958046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
164-345
               

               
Cow position:
               
chr10:58414396-58414576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 34
               

               
Conread position:
               
164-346
               

               
Cow position:
               
chr10:15298333-15298505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
164-347
               

               
Cow position:
               
chr10:42371700-42371891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
164-356
               

               
Cow position:
               
chr10:34674189-34674003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
138, 67
               

               
Conread position:
               
164-360
               

               
Cow position:
               
chr10:6384700-6384512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
141, 67
               

               
Conread position:
               
164-360
               

               
Cow position:
               
chr10:61921968-61922159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
133, 72
               

               
Conread position:
               
164-361
               

               
Cow position:
               
chr10:26671058-26670874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
164-361
               

               
Cow position:
               
chr10:45294965-45295162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
138, 24
               

               
Conread position:
               
164-361
               

               
Cow position:
               
chr10:62114860-62114668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
138, 30
               

               
Conread position:
               
164-370
               

               
Cow position:
               
chr10:37425963-37426162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
134, 31
               

               
Conread position:
               
164-391
               

               
Cow position:
               
chr10:41626767-41626546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
164-399
               

               
Cow position:
               
chr10:3276143-3275916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
134, 70
               

               
Conread position:
               
164-403
               

               
Cow position:
               
chr10:40164204-40164433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
160, 67
               

               
Conread position:
               
164-526
               

               
Cow position:
               
chr10:2613541-2613179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
164-538
               

               
Cow position:
               
chr10:20391259-20391642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 189
               

               
Conread position:
               
164-546
               

               
Cow position:
               
chr10:30353025-30352639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
126, 72
               

               
Conread position:
               
164-559
               

               
Cow position:
               
chr10:10148825-10148432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 76
               

               
Conread position:
               
164-559
               

               
Cow position:
               
chr10:20553354-20552963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
135, 32
               

               
Conread position:
               
165-306
               

               
Cow position:
               
chr10:24421998-24422139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
137, 89
               

               
Conread position:
               
165-358
               

               
Cow position:
               
chr10:64438345-64438149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
84, 113
               

               
Conread position:
               
166-359
               

               
Cow position:
               
chr10:54776719-54776528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
136, 21
               

               
Conread position:
               
167-291
               

               
Cow position:
               
chr10:23026664-23026544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
167-326
               

               
Cow position:
               
chr10:1417764-1417612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
167-326
               

               
Cow position:
               
chr10:18155494-18155335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
135, 93
               

               
Conread position:
               
167-336
               

               
Cow position:
               
chr10:58043955-58044123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
134, 81
               

               
Conread position:
               
167-339
               

               
Cow position:
               
chr10:5784080-5784252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
131, 86
               

               
Conread position:
               
167-339
               

               
Cow position:
               
chr10:27544624-27544455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
134, 75
               

               
Conread position:
               
167-340
               

               
Cow position:
               
chr10:60250899-60251077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
135, 93
               

               
Conread position:
               
167-343
               

               
Cow position:
               
chr10:15248867-15249044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
135, 93
               

               
Conread position:
               
167-347
               

               
Cow position:
               
chr10:9951375-9951194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
167-354
               

               
Cow position:
               
chr10:55599982-55600169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 41
               

               
Conread position:
               
167-355
               

               
Cow position:
               
chr10:36855955-36856145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 87
               

               
Conread position:
               
167-358
               

               
Cow position:
               
chr10:33185496-33185304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
135, 87
               

               
Conread position:
               
167-358
               

               
Cow position:
               
chr10:68910972-68911157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
135, 31
               

               
Conread position:
               
167-361
               

               
Cow position:
               
chr10:38430395-38430584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
135, 63
               

               
Conread position:
               
167-361
               

               
Cow position:
               
chr10:47559388-47559570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
135, 24
               

               
Conread position:
               
167-369
               

               
Cow position:
               
chr10:7383445-7383641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
134, 81
               

               
Conread position:
               
167-387
               

               
Cow position:
               
chr10:16830212-16830432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 84
               

               
Conread position:
               
167-405
               

               
Cow position:
               
chr10:2857219-2856987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
167-507
               

               
Cow position:
               
chr10:44764320-44764673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 7
               

               
Conread position:
               
167-551
               

               
Cow position:
               
chr10:69564778-69564392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
167-557
               

               
Cow position:
               
chr10:17844937-17844543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
167-559
               

               
Cow position:
               
chr10:8277727-8277324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
135, 92
               

               
Conread position:
               
167-559
               

               
Cow position:
               
chr10:64182615-64182232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 31
               

               
Conread position:
               
168-348
               

               
Cow position:
               
chr10:67243526-67243698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
133, 34
               

               
Conread position:
               
168-531
               

               
Cow position:
               
chr10:33914897-33915250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
134, 71
               

               
Conread position:
               
168-557
               

               
Cow position:
               
chr10:5543078-5543465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 80
               

               
Conread position:
               
169-347
               

               
Cow position:
               
chr10:27136515-27136694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
132, 85
               

               
Conread position:
               
169-370
               

               
Cow position:
               
chr10:37174283-37174482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
169-390
               

               
Cow position:
               
chr10:47182396-47182617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 91
               

               
Conread position:
               
170-517
               

               
Cow position:
               
chr10:45965664-45965322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
132, 66
               

               
Conread position:
               
171-360
               

               
Cow position:
               
chr10:19306622-19306800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
174-315
               

               
Cow position:
               
chr10:25462989-25462852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
128, 24
               

               
Conread position:
               
174-347
               

               
Cow position:
               
chr10:2984901-2985080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
174-370
               

               
Cow position:
               
chr10:23127820-23128015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
175-257
               

               
Cow position:
               
chr10:19394286-19394368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
83
               

               
Alignm identity:
               
74
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
175-283
               

               
Cow position:
               
chr10:54724090-54724193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
175-297
               

               
Cow position:
               
chr10:29713314-29713189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
175-311
               

               
Cow position:
               
chr10:24862939-24863077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
127, 79
               

               
Conread position:
               
175-332
               

               
Cow position:
               
chr10:58651029-58651180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
175-340
               

               
Cow position:
               
chr10:39124299-39124134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
126, 59
               

               
Conread position:
               
175-347
               

               
Cow position:
               
chr10:49634229-49634061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 57
               

               
Conread position:
               
175-358
               

               
Cow position:
               
chr10:21564913-21564732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
175-359
               

               
Cow position:
               
chr10:17797554-17797739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
91, 79
               

               
Conread position:
               
175-360
               

               
Cow position:
               
chr10:704823-705014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
175-360
               

               
Cow position:
               
chr10:39622200-39622374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
175-361
               

               
Cow position:
               
chr10:10575473-10575297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
127, 36
               

               
Conread position:
               
175-361
               

               
Cow position:
               
chr10:46262348-46262168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
175-361
               

               
Cow position:
               
chr10:58149006-58149189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
175-367
               

               
Cow position:
               
chr10:37507988-37508173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
123, 59
               

               
Conread position:
               
175-370
               

               
Cow position:
               
chr10:21923353-21923549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
127, 85
               

               
Conread position:
               
175-370
               

               
Cow position:
               
chr10:49168864-49169064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
175-477
               

               
Cow position:
               
chr10:13316123-13315804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
60, 45
               

               
Conread position:
               
175-540
               

               
Cow position:
               
chr10:1423996-1423637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
87, 63
               

               
Conread position:
               
175-546
               

               
Cow position:
               
chr10:35867853-35868206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
108, 84
               

               
Conread position:
               
175-554
               

               
Cow position:
               
chr10:24871335-24870952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 358
               

               
Conread position:
               
175-559
               

               
Cow position:
               
chr10:18042346-18041967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
175-559
               

               
Cow position:
               
chr10:50182890-50183265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 56
               

               
Conread position:
               
176-335
               

               
Cow position:
               
chr10:8281430-8281270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
176-336
               

               
Cow position:
               
chr10:4170523-4170687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
76, 94
               

               
Conread position:
               
176-346
               

               
Cow position:
               
chr10:6268840-6268674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
122, 72
               

               
Conread position:
               
176-347
               

               
Cow position:
               
chr10:19679268-19679092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
176-347
               

               
Cow position:
               
chr10:37785194-37785371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
176-347
               

               
Cow position:
               
chr10:44027721-44027548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
176-347
               

               
Cow position:
               
chr10:52695564-52695732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 69
               

               
Conread position:
               
176-357
               

               
Cow position:
               
chr10:44122263-44122090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
176-359
               

               
Cow position:
               
chr10:2709031-2708854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
176-359
               

               
Cow position:
               
chr10:15241128-15241311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 66
               

               
Conread position:
               
176-359
               

               
Cow position:
               
chr10:17448046-17448216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
125, 19
               

               
Conread position:
               
176-359
               

               
Cow position:
               
chr10:48619851-48620029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
126, 55
               

               
Conread position:
               
176-360
               

               
Cow position:
               
chr10:20133711-20133893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
176-361
               

               
Cow position:
               
chr10:55319656-55319476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
126, 56
               

               
Conread position:
               
176-368
               

               
Cow position:
               
chr10:15899942-15899751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
166, 75
               

               
Conread position:
               
176-370
               

               
Cow position:
               
chr10:30929722-30929916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
122, 53
               

               
Conread position:
               
176-559
               

               
Cow position:
               
chr10:42746073-42745695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
176-559
               

               
Cow position:
               
chr10:56828157-56828539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 60
               

               
Conread position:
               
177-339
               

               
Cow position:
               
chr10:17691075-17691235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
177-347
               

               
Cow position:
               
chr10:23071580-23071752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
125, 83
               

               
Conread position:
               
177-360
               

               
Cow position:
               
chr10:30261445-30261623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
120, 16
               

               
Conread position:
               
177-361
               

               
Cow position:
               
chr10:26577717-26577530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
177-361
               

               
Cow position:
               
chr10:51727264-51727439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
121, 54
               

               
Conread position:
               
177-381
               

               
Cow position:
               
chr10:31803320-31803520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
124, 48
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr10:16093372-16092997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
121, 68
               

               
Conread position:
               
177-562
               

               
Cow position:
               
chr10:721452-721078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
124, 60
               

               
Conread position:
               
178-345
               

               
Cow position:
               
chr10:11218039-11217871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
124, 82
               

               
Conread position:
               
178-359
               

               
Cow position:
               
chr10:46575667-46575493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
178-546
               

               
Cow position:
               
chr10:11576933-11576563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
179-323
               

               
Cow position:
               
chr10:32799097-32799240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
122, 44
               

               
Conread position:
               
179-541
               

               
Cow position:
               
chr10:29102182-29102535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
180-285
               

               
Cow position:
               
chr10:56908592-56908700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
180-361
               

               
Cow position:
               
chr10:64394241-64394059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
122, 80
               

               
Conread position:
               
180-476
               

               
Cow position:
               
chr10:15309250-15309533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
122, 18
               

               
Conread position:
               
180-524
               

               
Cow position:
               
chr10:61982549-61982208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
94, 79
               

               
Conread position:
               
181-347
               

               
Cow position:
               
chr10:14188454-14188616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
95, 55
               

               
Conread position:
               
181-361
               

               
Cow position:
               
chr10:41116058-41115885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
120, 46
               

               
Conread position:
               
181-546
               

               
Cow position:
               
chr10:5151510-5151146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
181-559
               

               
Cow position:
               
chr10:1488986-1488631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
117, 59
               

               
Conread position:
               
181-559
               

               
Cow position:
               
chr10:55122967-55122572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
181-559
               

               
Cow position:
               
chr10:58718811-58718435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
120, 17
               

               
Conread position:
               
182-310
               

               
Cow position:
               
chr10:15750972-15750844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
123, 103
               

               
Conread position:
               
183-526
               

               
Cow position:
               
chr10:48512922-48513271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
119, 71
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr10:10720516-10720894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 24
               

               
Conread position:
               
184-346
               

               
Cow position:
               
chr10:58488357-58488207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
184-347
               

               
Cow position:
               
chr10:59159408-59159237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
184-358
               

               
Cow position:
               
chr10:54699550-54699722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
115, 47
               

               
Conread position:
               
184-387
               

               
Cow position:
               
chr10:32503586-32503384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
117, 177
               

               
Conread position:
               
184-554
               

               
Cow position:
               
chr10:66194147-66194517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 32
               

               
Conread position:
               
186-346
               

               
Cow position:
               
chr10:46236956-46237111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
116, 69
               

               
Conread position:
               
187-359
               

               
Cow position:
               
chr10:8957173-8957345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
115, 67
               

               
Conread position:
               
187-388
               

               
Cow position:
               
chr10:41198046-41197843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
115, 67
               

               
Conread position:
               
188-359
               

               
Cow position:
               
chr10:23500076-23500248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
114, 66
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr10:47670716-47670546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 75
               

               
Conread position:
               
194-347
               

               
Cow position:
               
chr10:52278869-52278718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
194-515
               

               
Cow position:
               
chr10:37295526-37295839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
194-548
               

               
Cow position:
               
chr10:21462363-21462031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
169, 47
               

               
Conread position:
               
195-351
               

               
Cow position:
               
chr10:24808636-24808487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
201-333
               

               
Cow position:
               
chr10:51740634-51740503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 47
               

               
Conread position:
               
202-333
               

               
Cow position:
               
chr10:15570346-15570217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
99, 45
               

               
Conread position:
               
202-333
               

               
Cow position:
               
chr10:36775216-36775346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
202-356
               

               
Cow position:
               
chr10:13197687-13197846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
202-360
               

               
Cow position:
               
chr10:21515723-21515888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
203-347
               

               
Cow position:
               
chr10:282343-282201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 45
               

               
Conread position:
               
213-347
               

               
Cow position:
               
chr10:63932343-63932477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
215-355
               

               
Cow position:
               
chr10:13927865-13927720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
216-559
               

               
Cow position:
               
chr10:66211166-66211516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
86, 51
               

               
Conread position:
               
219-347
               

               
Cow position:
               
chr10:65359827-65359698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
222-472
               

               
Cow position:
               
chr10:52120862-52120607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
29, 177
               

               
Conread position:
               
225-559
               

               
Cow position:
               
chr10:36002315-36001985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
228-559
               

               
Cow position:
               
chr10:29252276-29251944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
229-360
               

               
Cow position:
               
chr10:62277215-62277348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
230-347
               

               
Cow position:
               
chr10:32573842-32573725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
230-347
               

               
Cow position:
               
chr10:32986057-32986174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
230-347
               

               
Cow position:
               
chr10:57457741-57457624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
230-360
               

               
Cow position:
               
chr10:13158226-13158094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
230-361
               

               
Cow position:
               
chr10:23923121-23922989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
230-361
               

               
Cow position:
               
chr10:33371498-33371365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
230-371
               

               
Cow position:
               
chr10:22810945-22811088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
230-525
               

               
Cow position:
               
chr10:67581399-67581088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 205
               

               
Conread position:
               
230-546
               

               
Cow position:
               
chr10:24375656-24375344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
230-546
               

               
Cow position:
               
chr10:50609666-50609333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
44, 29
               

               
Conread position:
               
230-559
               

               
Cow position:
               
chr10:24022169-24022501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
232-370
               

               
Cow position:
               
chr10:34660134-34660271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
233-361
               

               
Cow position:
               
chr10:33462276-33462405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
233-559
               

               
Cow position:
               
chr10:24732416-24732092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
21, 103
               

               
Conread position:
               
235-559
               

               
Cow position:
               
chr10:15293373-15293053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
236-361
               

               
Cow position:
               
chr10:29091241-29091366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
236-409
               

               
Cow position:
               
chr10:5020276-5020452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
236-409
               

               
Cow position:
               
chr10:15426975-15427150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
242-546
               

               
Cow position:
               
chr10:3999011-3998700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
41, 266
               

               
Conread position:
               
242-546
               

               
Cow position:
               
chr10:24132723-24133026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
243-559
               

               
Cow position:
               
chr10:34430124-34430433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 151
               

               
Conread position:
               
249-546
               

               
Cow position:
               
chr10:37173353-37173658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
256-364
               

               
Cow position:
               
chr10:58148846-58148951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
259-558
               

               
Cow position:
               
chr10:23936561-23936266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
259-559
               

               
Cow position:
               
chr10:33732788-33733087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
127, 61
               

               
Conread position:
               
262-559
               

               
Cow position:
               
chr10:22321604-22321301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
264-559
               

               
Cow position:
               
chr10:53934673-53934959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 90
               

               
Conread position:
               
427-559
               

               
Cow position:
               
chr10:35715796-35715928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 103
               

               
Conread position:
               
437-546
               

               
Cow position:
               
chr10:37709132-37709242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
437-554
               

               
Cow position:
               
chr10:48377738-48377858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
437-557
               

               
Cow position:
               
chr10:35857152-35857270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 91
               

               
Conread position:
               
437-559
               

               
Cow position:
               
chr10:24871791-24871667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
437-559
               

               
Cow position:
               
chr10:48317055-48317174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
437-559
               

               
Cow position:
               
chr10:57457238-57457114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
438-546
               

               
Cow position:
               
chr10:24548158-24548053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
438-560
               

               
Cow position:
               
chr10:49169151-49169276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
445-559
               

               
Cow position:
               
chr10:6516287-6516404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               
Show alignments to all cow chromosomes.