Cow genome map
| Conread name: | Ss1.1-Pla1-C0000934_E19.5 |
| Conread position: | 290-792 |
| Cow position: | chr17:22552813-22552317 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 325-758 |
| Cow position: | chr17:22499327-22498894 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 325-779 |
| Cow position: | chr17:22552280-22551826 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 278 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 325-779 |
| Cow position: | chr17:22552448-22551994 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 271 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 325-791 |
| Cow position: | chr17:22452229-22451763 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 327-768 |
| Cow position: | chr17:22473488-22473930 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 284 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 57, 96 |
| Conread position: | 328-791 |
| Cow position: | chr17:22473405-22473868 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 149, 142 |
| Conread position: | 333-768 |
| Cow position: | chr17:22552692-22552257 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 66 |
| Conread position: | 356-780 |
| Cow position: | chr17:22473349-22473773 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 398-779 |
| Cow position: | chr17:22499422-22499041 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 411-789 |
| Cow position: | chr17:22552278-22551900 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 27 |
| Conread position: | 411-791 |
| Cow position: | chr17:22499325-22498945 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 411-792 |
| Cow position: | chr17:22452227-22451846 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 111, 101 |
| Conread position: | 416-791 |
| Cow position: | chr17:22452390-22452015 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 5, 18 |
| Conread position: | 417-792 |
| Cow position: | chr17:22473326-22473701 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 303, 309 |
| Conread position: | 424-768 |
| Cow position: | chr17:22551929-22551585 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 424-792 |
| Cow position: | chr17:22452046-22451678 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 37, 41 |
| Conread position: | 425-779 |
| Cow position: | chr17:22553020-22552666 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 209, 220 |
| Conread position: | 428-791 |
| Cow position: | chr17:22499140-22498777 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 133, 125 |
| Conread position: | 430-778 |
| Cow position: | chr17:22498888-22498538 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 84 |
| Conread position: | 441-792 |
| Cow position: | chr17:22553085-22552737 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 8 |
| Conread position: | 475-791 |
| Cow position: | chr17:22473219-22473532 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 564-792 |
| Cow position: | chr17:22452410-22452182 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.