Cow genome map
| Conread name: | Ss1.1-Pla1-C0000934_E19.5 |
| Conread position: | 315-792 |
| Cow position: | chr23:24547187-24546712 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 283 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 325-767 |
| Cow position: | chr23:24639619-24640061 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 325-768 |
| Cow position: | chr23:24547095-24546653 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 325-769 |
| Cow position: | chr23:24560571-24560127 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 325-780 |
| Cow position: | chr23:24547263-24546808 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 278 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 325-791 |
| Cow position: | chr23:24639535-24640001 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 325-792 |
| Cow position: | chr23:25660218-25660685 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 357-792 |
| Cow position: | chr23:24547315-24546880 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 278 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 39, 46 |
| Conread position: | 358-768 |
| Cow position: | chr23:25660167-25660577 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 63, 72 |
| Conread position: | 402-791 |
| Cow position: | chr23:25626258-25626644 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 322, 0 |
| Conread position: | 420-792 |
| Cow position: | chr23:24560559-24560188 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 423-760 |
| Cow position: | chr23:25660401-25660737 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 34, 7 |
| Conread position: | 424-768 |
| Cow position: | chr23:24535963-24535619 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-791 |
| Cow position: | chr23:24639466-24639833 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 98, 84 |
| Conread position: | 424-792 |
| Cow position: | chr23:25626613-25626981 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 426-743 |
| Cow position: | chr23:24522486-24522167 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 426-768 |
| Cow position: | chr23:25626532-25626873 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 428-792 |
| Cow position: | chr23:24560804-24560440 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 430-791 |
| Cow position: | chr23:24522812-24522455 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 8 |
| Conread position: | 430-792 |
| Cow position: | chr23:24560718-24560356 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 438-792 |
| Cow position: | chr23:24560628-24560272 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 438-792 |
| Cow position: | chr23:25626460-25626813 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 12, 123 |
| Conread position: | 439-791 |
| Cow position: | chr23:24626319-24626673 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 8, 102 |
| Conread position: | 439-792 |
| Cow position: | chr23:24639395-24639750 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 8, 32 |
| Conread position: | 449-791 |
| Cow position: | chr23:24522544-24522203 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 73, 15 |
| Conread position: | 454-792 |
| Cow position: | chr23:25660180-25660517 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 489-791 |
| Cow position: | chr23:24522589-24522287 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 118, 109 |
| Conread position: | 510-792 |
| Cow position: | chr23:24654033-24654315 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 41, 29 |
| Conread position: | 514-767 |
| Cow position: | chr23:25724039-25723786 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 529-792 |
| Cow position: | chr23:25724108-25723845 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 539-791 |
| Cow position: | chr23:25626058-25626311 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 539-792 |
| Cow position: | chr23:25660180-25660433 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 553-791 |
| Cow position: | chr23:24522609-24522371 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 574-780 |
| Cow position: | chr23:24626540-24626744 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 574-792 |
| Cow position: | chr23:24626372-24626590 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.