Cow genome map
| Conread name: | Ss1.1-Pla1-C0000934_E19.5 |
| Conread position: | 316-792 |
| Cow position: | chr8:46816272-46816746 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 286 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 105, 7 |
| Conread position: | 325-768 |
| Cow position: | chr8:48407480-48407037 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 325-780 |
| Cow position: | chr8:46816531-46816986 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 325-783 |
| Cow position: | chr8:45201504-45201962 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 325-790 |
| Cow position: | chr8:45201252-45201717 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 325-791 |
| Cow position: | chr8:45201168-45201634 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 325-792 |
| Cow position: | chr8:55581140-55581607 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 326-792 |
| Cow position: | chr8:45201085-45201551 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 326-792 |
| Cow position: | chr8:46816700-46817166 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 47 |
| Conread position: | 327-792 |
| Cow position: | chr8:55580890-55581355 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 94, 100 |
| Conread position: | 334-792 |
| Cow position: | chr8:48407555-48407097 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 97 |
| Conread position: | 349-792 |
| Cow position: | chr8:45200941-45201383 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 138, 9 |
| Conread position: | 379-791 |
| Cow position: | chr8:46816417-46816829 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 177, 182 |
| Conread position: | 395-792 |
| Cow position: | chr8:55580874-55581271 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 398-791 |
| Cow position: | chr8:48407239-48406846 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 50, 69 |
| Conread position: | 404-790 |
| Cow position: | chr8:45201079-45201465 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-792 |
| Cow position: | chr8:46816193-46816578 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 121, 101 |
| Conread position: | 407-792 |
| Cow position: | chr8:46816697-46817082 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 29 |
| Conread position: | 423-767 |
| Cow position: | chr8:46815958-46816301 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 423-791 |
| Cow position: | chr8:45201519-45201886 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 424-768 |
| Cow position: | chr8:48407549-48407205 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 98, 88 |
| Conread position: | 424-792 |
| Cow position: | chr8:46816042-46816410 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 98, 84 |
| Conread position: | 424-792 |
| Cow position: | chr8:46816126-46816494 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 132, 148 |
| Conread position: | 428-768 |
| Cow position: | chr8:46816886-46817226 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 429-791 |
| Cow position: | chr8:45200936-45201298 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 430-768 |
| Cow position: | chr8:55581077-55581415 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 116, 82 |
| Conread position: | 443-792 |
| Cow position: | chr8:48407614-48407265 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 35 |
| Conread position: | 460-792 |
| Cow position: | chr8:45200883-45201215 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 262, 268 |
| Conread position: | 489-791 |
| Cow position: | chr8:45201500-45201802 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 573-792 |
| Cow position: | chr8:46816023-46816242 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.