Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 807-1080 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 78, 122 |
| Conread position: | 821-1074 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 20, 111 |
| Conread position: | 825-992 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 104 |
| Conread position: | 826-1079 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 828-1076 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 27, 160 |
| Conread position: | 829-1080 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 11, 100 |
| Conread position: | 830-1055 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 51, 98 |
| Conread position: | 830-1058 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 830-1080 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 831-1022 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 11, 57 |
| Conread position: | 831-1040 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 832-1076 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 834-1010 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 95 |
| Conread position: | 834-1080 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 841-1080 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 78 |
| Conread position: | 843-1038 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 843-1061 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 843-1076 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 843-1076 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 39, 28 |
| Conread position: | 844-1076 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 84 |
| Conread position: | 845-975 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 845-992 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 845-1032 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 38, 83 |
| Conread position: | 845-1076 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 845-1076 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 845-1080 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 845-1080 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 846-1054 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 847-1080 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 10, 82 |
| Conread position: | 848-1080 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 37, 8 |
| Conread position: | 849-1040 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 854-1080 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 74 |
| Conread position: | 858-1054 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 862-1080 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 161, 18 |
| Conread position: | 880-1037 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 143, 38 |
| Conread position: | 880-1053 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 143, 38 |
| Conread position: | 880-1059 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 126, 39 |
| Conread position: | 880-1074 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 129, 38 |
| Conread position: | 880-1076 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 114, 38 |
| Conread position: | 880-1080 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 143, 39 |
| Conread position: | 885-1032 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 885-1055 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 885-1058 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 139, 36 |
| Conread position: | 885-1059 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 33, 122 |
| Conread position: | 885-1079 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 885-1080 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 885-1080 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 135, 35 |
| Conread position: | 885-1080 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 161 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 886-1076 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 138, 32 |
| Conread position: | 886-1080 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 130, 32 |
| Conread position: | 886-1080 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 157 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 138, 32 |
| Conread position: | 887-1010 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 888-986 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 889-1080 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 133, 30 |
| Conread position: | 895-1074 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 101, 23 |
| Conread position: | 897-1022 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 917-1079 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 107, 24 |
| Conread position: | 947-1069 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 76, 56 |
| Conread position: | 953-1076 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.