Cow genome map

Conread name: Ss1.1-Spl1-SPL010005A09.5

Conread position: 806-1076
Cow position: chr10:45195978-45195703 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 20, 123

Conread position: 817-1001
Cow position: chr10:17513293-17513478 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 71

Conread position: 822-1072
Cow position: chr10:37428092-37428347 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 18

Conread position: 824-1079
Cow position: chr10:21477555-21477307 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 125, 21

Conread position: 825-1075
Cow position: chr10:19128213-19128469 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 120, 18

Conread position: 827-1037
Cow position: chr10:29487449-29487243 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 196, 58

Conread position: 828-1076
Cow position: chr10:37664997-37665253 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 202
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 29, 101

Conread position: 830-988
Cow position: chr10:58937042-58937197 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 56

Conread position: 830-1035
Cow position: chr10:25536621-25536403 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 55, 15

Conread position: 831-971
Cow position: chr10:46010128-46010276 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 22

Conread position: 833-1039
Cow position: chr10:62629903-62629705 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 833-1072
Cow position: chr10:12199603-12199349 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 52, 81

Conread position: 833-1080
Cow position: chr10:3318464-3318210 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 200
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 46, 12

Conread position: 833-1080
Cow position: chr10:52132149-52131897 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 95

Conread position: 837-1078
Cow position: chr10:23879579-23879823 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 48, 14

Conread position: 837-1079
Cow position: chr10:17415322-17415559 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 55

Conread position: 841-978
Cow position: chr10:9464793-9464655 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 7, 23

Conread position: 844-1080
Cow position: chr10:68203516-68203757 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 79

Conread position: 845-992
Cow position: chr10:30708567-30708722 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 82

Conread position: 845-1018
Cow position: chr10:30320983-30320810 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 85

Conread position: 845-1055
Cow position: chr10:17745678-17745467 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 77

Conread position: 845-1071
Cow position: chr10:41638365-41638130 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 83

Conread position: 845-1076
Cow position: chr10:22455758-22455525 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 83

Conread position: 845-1080
Cow position: chr10:767219-767456 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 83

Conread position: 845-1080
Cow position: chr10:24609359-24609113 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 83

Conread position: 845-1080
Cow position: chr10:57404114-57404340 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 48

Conread position: 847-1076
Cow position: chr10:5421807-5422046 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 81

Conread position: 847-1080
Cow position: chr10:11276236-11275999 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 33, 74

Conread position: 849-1010
Cow position: chr10:55437459-55437622 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 36, 71

Conread position: 857-1039
Cow position: chr10:4013841-4013657 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 66

Conread position: 868-1076
Cow position: chr10:28565592-28565795 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 56

Conread position: 879-1018
Cow position: chr10:25008678-25008811 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 880-1050
Cow position: chr10:63621345-63621508 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 144, 38

Conread position: 880-1073
Cow position: chr10:54342774-54342967 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 143, 40

Conread position: 880-1079
Cow position: chr10:35182217-35182020 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 141, 38

Conread position: 880-1080
Cow position: chr10:67051418-67051223 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 881-1080
Cow position: chr10:15617921-15618108 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 140, 31

Conread position: 885-1072
Cow position: chr10:60244138-60243958 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 135, 33

Conread position: 885-1079
Cow position: chr10:18863392-18863203 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 128, 33

Conread position: 885-1080
Cow position: chr10:16668820-16669014 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 33, 0

Conread position: 886-1050
Cow position: chr10:4993910-4994070 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 7

Conread position: 888-1076
Cow position: chr10:31220683-31220498 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 45, 30

Conread position: 889-1049
Cow position: chr10:49279995-49280156 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 134, 30

Conread position: 895-1080
Cow position: chr10:15824016-15824198 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 129, 23

Conread position: 896-1080
Cow position: chr10:68980037-68979861 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 127, 27

Conread position: 901-1069
Cow position: chr10:37092578-37092746 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 72, 13

Conread position: 907-1080
Cow position: chr10:48193195-48193366 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 107, 11

Conread position: 963-1080
Cow position: chr10:27223219-27223102 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 61, 41

Show alignments to all cow chromosomes.