Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 825-1059 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 106 |
| Conread position: | 826-1022 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 827-1073 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 27 |
| Conread position: | 829-1008 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 829-1080 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 831-1076 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 12 |
| Conread position: | 831-1080 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 192, 62 |
| Conread position: | 833-1040 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 190, 36 |
| Conread position: | 833-1058 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 833-1071 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 833-1080 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 93 |
| Conread position: | 834-1071 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 834-1076 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 51, 19 |
| Conread position: | 837-1080 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 91 |
| Conread position: | 838-1076 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 843-1066 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 98, 10 |
| Conread position: | 843-1079 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 843-1080 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 40, 57 |
| Conread position: | 843-1080 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 22, 81 |
| Conread position: | 843-1080 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 845-985 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 845-989 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 60 |
| Conread position: | 845-1001 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 80 |
| Conread position: | 845-1019 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 40, 107 |
| Conread position: | 845-1054 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 845-1062 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 40, 80 |
| Conread position: | 845-1074 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 845-1076 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 845-1080 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 845-1080 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 11, 56 |
| Conread position: | 845-1080 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 77 |
| Conread position: | 845-1080 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 846-1076 |
| Cow position: | |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 147, 39 |
| Conread position: | 846-1080 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 67 |
| Conread position: | 846-1080 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 39, 54 |
| Conread position: | 846-1080 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 847-1080 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 855-1080 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 857-1073 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 24, 68 |
| Conread position: | 863-1076 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 56 |
| Conread position: | 878-1079 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 143, 41 |
| Conread position: | 879-1033 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 131, 39 |
| Conread position: | 879-1062 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 145, 39 |
| Conread position: | 879-1076 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 145, 39 |
| Conread position: | 880-999 |
| Cow position: | |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 880-1022 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 880-1025 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 880-1054 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 38 |
| Conread position: | 880-1076 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 880-1080 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 143, 38 |
| Conread position: | 880-1080 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 145, 38 |
| Conread position: | 880-1080 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 143, 38 |
| Conread position: | 881-1080 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 16, 65 |
| Conread position: | 885-1007 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 33 |
| Conread position: | 885-1076 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 156, 33 |
| Conread position: | 885-1076 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 139, 33 |
| Conread position: | 885-1080 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 888-1080 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 14 |
| Conread position: | 895-1076 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 895-1076 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 897-1080 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 97, 21 |
| Conread position: | 910-1080 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 910-1080 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 910-1080 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 114, 8 |
| Conread position: | 919-1022 |
| Cow position: | |
| Alignm length: | 104 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 940-1079 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 84, 34 |
Show alignments to all cow chromosomes.