Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 811-1080 |
| Cow position: | chr12:21066801-21066517 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 74, 16 |
| Conread position: | 824-1021 |
| Cow position: | chr12:33278481-33278285 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 75 |
| Conread position: | 827-987 |
| Cow position: | chr12:39710200-39710033 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 15 |
| Conread position: | 827-1080 |
| Cow position: | chr12:11306062-11306322 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 830-1013 |
| Cow position: | chr12:20791969-20792162 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 836-1080 |
| Cow position: | chr12:5896500-5896760 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 837-1076 |
| Cow position: | chr12:33350902-33350661 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 14, 91 |
| Conread position: | 841-1037 |
| Cow position: | chr12:27111435-27111234 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 84 |
| Conread position: | 844-1080 |
| Cow position: | chr12:10161386-10161638 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 844-1080 |
| Cow position: | chr12:20226820-20227064 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 39, 83 |
| Conread position: | 845-1038 |
| Cow position: | chr12:15147611-15147399 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 40, 90 |
| Conread position: | 845-1076 |
| Cow position: | chr12:8467633-8467872 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 845-1076 |
| Cow position: | chr12:16962159-16961917 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 845-1080 |
| Cow position: | chr12:2837701-2837935 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 845-1080 |
| Cow position: | chr12:33277058-33277297 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 40, 84 |
| Conread position: | 845-1080 |
| Cow position: | chr12:34476155-34475920 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 40, 87 |
| Conread position: | 846-1055 |
| Cow position: | chr12:42854323-42854111 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 104 |
| Conread position: | 879-1080 |
| Cow position: | chr12:23499332-23499133 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 136, 27 |
| Conread position: | 880-1048 |
| Cow position: | chr12:29801706-29801536 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 135, 39 |
| Conread position: | 880-1080 |
| Cow position: | chr12:36974914-36975104 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 885-1071 |
| Cow position: | chr12:28214602-28214425 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 885-1076 |
| Cow position: | chr12:26310598-26310774 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 139, 34 |
| Conread position: | 885-1076 |
| Cow position: | chr12:27423766-27423579 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 885-1080 |
| Cow position: | chr12:1993060-1993259 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 118, 34 |
| Conread position: | 885-1080 |
| Cow position: | chr12:7024935-7025131 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 139, 10 |
| Conread position: | 885-1080 |
| Cow position: | chr12:29758977-29759173 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 124, 33 |
| Conread position: | 886-1022 |
| Cow position: | chr12:25514608-25514471 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 887-1079 |
| Cow position: | chr12:7936571-7936753 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 137, 31 |
| Conread position: | 899-1080 |
| Cow position: | chr12:12763715-12763893 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 147, 19 |
Show alignments to all cow chromosomes.