Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 806-992 |
| Cow position: | chr14:38412896-38413089 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 15 |
| Conread position: | 808-1076 |
| Cow position: | chr14:15012067-15011792 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 20 |
| Conread position: | 816-1080 |
| Cow position: | chr14:36420620-36420353 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 210 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 12, 182 |
| Conread position: | 825-985 |
| Cow position: | chr14:20643216-20643057 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 26 |
| Conread position: | 833-1076 |
| Cow position: | chr14:50649978-50650232 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 834-1073 |
| Cow position: | chr14:28007051-28007295 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 834-1075 |
| Cow position: | chr14:22046288-22046527 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 18, 149 |
| Conread position: | 835-1077 |
| Cow position: | chr14:45529742-45529984 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 835-1080 |
| Cow position: | chr14:30762110-30762343 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 836-1076 |
| Cow position: | chr14:41712467-41712700 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 47, 66 |
| Conread position: | 841-1075 |
| Cow position: | chr14:44453889-44454125 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 841-1076 |
| Cow position: | chr14:25994578-25994339 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 843-1055 |
| Cow position: | chr14:10950063-10949842 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 88 |
| Conread position: | 844-1080 |
| Cow position: | chr14:38722316-38722552 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 41, 83 |
| Conread position: | 844-1080 |
| Cow position: | chr14:47880675-47880432 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 41, 115 |
| Conread position: | 845-1000 |
| Cow position: | chr14:29481371-29481207 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 845-1073 |
| Cow position: | chr14:37999853-38000079 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 75 |
| Conread position: | 845-1076 |
| Cow position: | chr14:35605870-35605633 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 845-1080 |
| Cow position: | chr14:34912503-34912264 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 845-1080 |
| Cow position: | chr14:40243615-40243863 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 40, 84 |
| Conread position: | 845-1080 |
| Cow position: | chr14:42693106-42693332 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 110, 40 |
| Conread position: | 845-1080 |
| Cow position: | chr14:44885993-44886237 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 43, 169 |
| Conread position: | 846-1080 |
| Cow position: | chr14:37983957-37983717 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 82 |
| Conread position: | 847-1073 |
| Cow position: | chr14:19735316-19735080 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 38, 81 |
| Conread position: | 847-1080 |
| Cow position: | chr14:32904185-32903948 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 8, 83 |
| Conread position: | 858-1079 |
| Cow position: | chr14:17051036-17051262 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 71 |
| Conread position: | 879-1080 |
| Cow position: | chr14:30134356-30134152 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 111, 40 |
| Conread position: | 885-1080 |
| Cow position: | chr14:17556129-17556324 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 137, 27 |
| Conread position: | 886-1066 |
| Cow position: | chr14:35685601-35685425 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 124, 32 |
| Conread position: | 889-1080 |
| Cow position: | chr14:15662723-15662534 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 125, 29 |
| Conread position: | 895-1074 |
| Cow position: | chr14:32574650-32574835 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 98, 23 |
| Conread position: | 897-1038 |
| Cow position: | chr14:44771588-44771727 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 126, 21 |
| Conread position: | 906-1080 |
| Cow position: | chr14:24738756-24738936 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 76, 12 |
| Conread position: | 917-1075 |
| Cow position: | chr14:9500378-9500231 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 106, 6 |
| Conread position: | 919-1074 |
| Cow position: | chr14:23938734-23938579 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 96, 60 |
| Conread position: | 926-1080 |
| Cow position: | chr14:42258492-42258646 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 98, 119 |
| Conread position: | 935-1080 |
| Cow position: | chr14:46980468-46980325 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 84 |
Show alignments to all cow chromosomes.