Cow genome map

Conread name: Ss1.1-Spl1-SPL010005A09.5

Conread position: 825-1080
Cow position: chr15:11287102-11287365 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 17

Conread position: 827-1076
Cow position: chr15:12048467-12048709 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 12, 80

Conread position: 828-1061
Cow position: chr15:23266057-23265818 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 15

Conread position: 828-1076
Cow position: chr15:8630618-8630367 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 13, 84

Conread position: 832-1080
Cow position: chr15:5912104-5912365 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 15, 99

Conread position: 836-1080
Cow position: chr15:16971873-16972116 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 9

Conread position: 842-1080
Cow position: chr15:52869087-52868845 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 198
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 37, 86

Conread position: 843-1076
Cow position: chr15:583112-582867 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 110

Conread position: 843-1080
Cow position: chr15:30570408-30570158 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 42, 13

Conread position: 843-1080
Cow position: chr15:53713108-53712860 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 87

Conread position: 844-1008
Cow position: chr15:41807274-41807445 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 71

Conread position: 844-1076
Cow position: chr15:9437763-9437530 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 97

Conread position: 844-1079
Cow position: chr15:10581663-10581432 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 10, 38

Conread position: 845-988
Cow position: chr15:1992923-1992771 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 83

Conread position: 845-1020
Cow position: chr15:35067198-35067014 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 79

Conread position: 845-1067
Cow position: chr15:37633631-37633398 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 39, 85

Conread position: 845-1072
Cow position: chr15:31935798-31935565 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 40, 83

Conread position: 845-1080
Cow position: chr15:16669158-16669403 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 29

Conread position: 845-1080
Cow position: chr15:40066155-40065914 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 82

Conread position: 846-998
Cow position: chr15:36277930-36278089 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 80

Conread position: 846-1038
Cow position: chr15:16989757-16989556 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 82

Conread position: 846-1076
Cow position: chr15:6523180-6523418 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 11, 70

Conread position: 846-1079
Cow position: chr15:17642459-17642226 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 189
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 38, 79

Conread position: 846-1079
Cow position: chr15:21182260-21182019 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 82

Conread position: 846-1080
Cow position: chr15:25683963-25683720 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 81

Conread position: 846-1080
Cow position: chr15:44797012-44797243 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 182, 39

Conread position: 846-1080
Cow position: chr15:52132105-52131864 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 83

Conread position: 847-1022
Cow position: chr15:7443663-7443849 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 81

Conread position: 847-1063
Cow position: chr15:49272195-49271975 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 77

Conread position: 849-1076
Cow position: chr15:50243546-50243320 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 53

Conread position: 853-1076
Cow position: chr15:21802798-21802573 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 30, 75

Conread position: 855-1074
Cow position: chr15:49279209-49279440 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 139

Conread position: 879-1073
Cow position: chr15:13081543-13081342 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 92, 39

Conread position: 879-1075
Cow position: chr15:9427796-9427997 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 43

Conread position: 879-1079
Cow position: chr15:1888294-1888100 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 145, 37

Conread position: 880-1080
Cow position: chr15:11997978-11997775 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 121, 38

Conread position: 880-1080
Cow position: chr15:12283386-12283195 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 143, 40

Conread position: 880-1080
Cow position: chr15:39809727-39809529 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 164
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 143, 39

Conread position: 881-1080
Cow position: chr15:53728057-53728253 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 113, 0

Conread position: 885-1073
Cow position: chr15:28607954-28608149 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 109, 33

Conread position: 885-1080
Cow position: chr15:14810722-14810904 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 33

Conread position: 885-1080
Cow position: chr15:53335569-53335372 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 139, 33

Conread position: 906-1076
Cow position: chr15:37469763-37469940 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 907-1076
Cow position: chr15:1891994-1892158 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 12

Conread position: 923-1080
Cow position: chr15:34552110-34551954 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 67

Conread position: 929-1080
Cow position: chr15:36864383-36864533 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 72, 51

Conread position: 934-1079
Cow position: chr15:35042551-35042404 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 70

Conread position: 942-1080
Cow position: chr15:39360017-39360157 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 73, 102

Show alignments to all cow chromosomes.