Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 825-1080 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 827-1076 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 828-1061 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 828-1076 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 13, 84 |
| Conread position: | 832-1080 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 15, 99 |
| Conread position: | 836-1080 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 842-1080 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 198 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 37, 86 |
| Conread position: | 843-1076 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 42, 110 |
| Conread position: | 843-1080 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 843-1080 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 844-1008 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 844-1076 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 41, 97 |
| Conread position: | 844-1079 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 845-988 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 845-1020 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 845-1067 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 39, 85 |
| Conread position: | 845-1072 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 845-1080 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 40, 29 |
| Conread position: | 845-1080 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 846-998 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 846-1038 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 846-1076 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 11, 70 |
| Conread position: | 846-1079 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 38, 79 |
| Conread position: | 846-1079 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 846-1080 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 81 |
| Conread position: | 846-1080 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 182, 39 |
| Conread position: | 846-1080 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 847-1022 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 81 |
| Conread position: | 847-1063 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 38, 77 |
| Conread position: | 849-1076 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 53 |
| Conread position: | 853-1076 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 30, 75 |
| Conread position: | 855-1074 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 139 |
| Conread position: | 879-1073 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 92, 39 |
| Conread position: | 879-1075 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 879-1079 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 145, 37 |
| Conread position: | 880-1080 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 121, 38 |
| Conread position: | 880-1080 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 143, 40 |
| Conread position: | 880-1080 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 164 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 143, 39 |
| Conread position: | 881-1080 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 885-1073 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 109, 33 |
| Conread position: | 885-1080 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 885-1080 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 139, 33 |
| Conread position: | 906-1076 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 907-1076 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 12 |
| Conread position: | 923-1080 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 98, 67 |
| Conread position: | 929-1080 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 72, 51 |
| Conread position: | 934-1079 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 87, 70 |
| Conread position: | 942-1080 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 73, 102 |
Show alignments to all cow chromosomes.