Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 806-1080 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 123 |
| Conread position: | 822-1035 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 7, 20 |
| Conread position: | 824-1080 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 825-1054 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 825-1076 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 830-985 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 830-1080 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 55, 98 |
| Conread position: | 832-1080 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 49, 92 |
| Conread position: | 834-1064 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 52, 94 |
| Conread position: | 835-1079 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 836-1080 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 843-1071 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 843-1074 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 40, 10 |
| Conread position: | 844-1036 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 179, 35 |
| Conread position: | 844-1080 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 180 |
| Conread position: | 845-980 |
| Cow position: | |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 845-995 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 845-1069 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 845-1079 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 845-1080 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 845-1080 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 40, 73 |
| Conread position: | 846-1051 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 846-1076 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 178, 33 |
| Conread position: | 846-1080 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 846-1080 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 847-1080 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 36, 81 |
| Conread position: | 859-1080 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 880-1064 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 156 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 143, 38 |
| Conread position: | 880-1074 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 135, 38 |
| Conread position: | 885-1076 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 137, 20 |
| Conread position: | 885-1076 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 139, 33 |
| Conread position: | 885-1080 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 886-1072 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 137, 32 |
| Conread position: | 887-1080 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 127, 32 |
| Conread position: | 887-1080 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 163 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 136, 31 |
| Conread position: | 896-1065 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 127, 19 |
| Conread position: | 912-1010 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 919-1058 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 105, 26 |
Show alignments to all cow chromosomes.