Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 808-1073 |
| Cow position: | chr17:34319464-34319746 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 34 |
| Conread position: | 816-1080 |
| Cow position: | chr17:28846979-28847255 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 114 |
| Conread position: | 830-1040 |
| Cow position: | chr17:4625411-4625197 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 53, 98 |
| Conread position: | 830-1072 |
| Cow position: | chr17:10850706-10850948 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 101 |
| Conread position: | 831-1055 |
| Cow position: | chr17:43143152-43143377 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 838-1057 |
| Cow position: | chr17:27622272-27622490 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 841-1080 |
| Cow position: | chr17:3223988-3223754 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 844-1076 |
| Cow position: | chr17:2736352-2736113 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 845-1080 |
| Cow position: | chr17:7211249-7211014 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 38, 83 |
| Conread position: | 846-1072 |
| Cow position: | chr17:30330941-30330729 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 846-1076 |
| Cow position: | chr17:1309645-1309868 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 147, 39 |
| Conread position: | 847-1074 |
| Cow position: | chr17:3096349-3096123 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 7 |
| Conread position: | 847-1079 |
| Cow position: | chr17:18417601-18417848 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 170 |
| Conread position: | 855-996 |
| Cow position: | chr17:26630587-26630735 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 855-1007 |
| Cow position: | chr17:13236138-13235977 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 30, 73 |
| Conread position: | 855-1073 |
| Cow position: | chr17:6980118-6980351 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 29, 65 |
| Conread position: | 856-1050 |
| Cow position: | chr17:10261735-10261537 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 857-1076 |
| Cow position: | chr17:15451115-15450895 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 859-1075 |
| Cow position: | chr17:13703906-13703693 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 873-1079 |
| Cow position: | chr17:12842860-12842658 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 113, 5 |
| Conread position: | 878-1080 |
| Cow position: | chr17:701990-701787 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 145, 40 |
| Conread position: | 879-1058 |
| Cow position: | chr17:26481416-26481236 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 144, 41 |
| Conread position: | 880-1017 |
| Cow position: | chr17:19447194-19447332 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 122, 21 |
| Conread position: | 880-1074 |
| Cow position: | chr17:11225774-11225583 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 142, 39 |
| Conread position: | 885-1080 |
| Cow position: | chr17:32451068-32451269 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 119, 33 |
| Conread position: | 885-1080 |
| Cow position: | chr17:33271194-33271386 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 159 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 886-1080 |
| Cow position: | chr17:19789294-19789478 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 137, 32 |
| Conread position: | 894-1078 |
| Cow position: | chr17:404435-404252 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 130, 26 |
| Conread position: | 895-1076 |
| Cow position: | chr17:3849306-3849129 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 129, 23 |
Show alignments to all cow chromosomes.