Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 830-1080 |
| Cow position: | chr18:22064801-22065043 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 181, 55 |
| Conread position: | 831-1050 |
| Cow position: | chr18:52871186-52870961 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 832-1080 |
| Cow position: | chr18:21122954-21123200 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 833-1080 |
| Cow position: | chr18:23316216-23316452 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 12, 53 |
| Conread position: | 834-1080 |
| Cow position: | chr18:53047483-53047733 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 838-972 |
| Cow position: | chr18:35470992-35471134 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 842-1080 |
| Cow position: | chr18:39474699-39474953 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 41, 86 |
| Conread position: | 843-1080 |
| Cow position: | chr18:32861217-32860971 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 845-988 |
| Cow position: | chr18:32371559-32371708 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 80 |
| Conread position: | 845-1065 |
| Cow position: | chr18:1129458-1129238 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 85 |
| Conread position: | 845-1076 |
| Cow position: | chr18:48952828-48952593 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 103 |
| Conread position: | 845-1078 |
| Cow position: | chr18:16259830-16259587 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 191 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 845-1080 |
| Cow position: | chr18:49436916-49436673 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 40, 84 |
| Conread position: | 845-1080 |
| Cow position: | chr18:53029257-53029038 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 846-1080 |
| Cow position: | chr18:1701146-1700912 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 846-1080 |
| Cow position: | chr18:22433224-22433466 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 848-1080 |
| Cow position: | chr18:27405446-27405212 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 37, 69 |
| Conread position: | 856-1079 |
| Cow position: | chr18:50881031-50880806 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 869-1066 |
| Cow position: | chr18:8170950-8170755 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 143, 16 |
| Conread position: | 880-1058 |
| Cow position: | chr18:5060015-5060195 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 38 |
| Conread position: | 885-996 |
| Cow position: | chr18:26667793-26667686 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 885-1022 |
| Cow position: | chr18:51332108-51331973 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 121, 36 |
| Conread position: | 886-1079 |
| Cow position: | chr18:28086091-28085898 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 159 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 127, 33 |
| Conread position: | 887-1040 |
| Cow position: | chr18:36456551-36456399 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 127, 31 |
Show alignments to all cow chromosomes.