Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 815-1054 |
| Cow position: | chr19:17439494-17439722 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 23, 71 |
| Conread position: | 822-1076 |
| Cow position: | chr19:47772630-47772371 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 32, 107 |
| Conread position: | 829-1080 |
| Cow position: | chr19:4601105-4600853 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 830-1022 |
| Cow position: | chr19:12477945-12478145 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 53, 99 |
| Conread position: | 834-1055 |
| Cow position: | chr19:28560210-28560451 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 834-1080 |
| Cow position: | chr19:30051412-30051661 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 96 |
| Conread position: | 837-1062 |
| Cow position: | chr19:36388345-36388574 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 93 |
| Conread position: | 837-1080 |
| Cow position: | chr19:30880412-30880163 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 45, 90 |
| Conread position: | 843-1076 |
| Cow position: | chr19:22670283-22670512 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 180, 42 |
| Conread position: | 845-977 |
| Cow position: | chr19:33955347-33955205 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 845-1022 |
| Cow position: | chr19:39299311-39299495 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 46, 78 |
| Conread position: | 845-1051 |
| Cow position: | chr19:6478227-6478445 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 83 |
| Conread position: | 845-1061 |
| Cow position: | chr19:30451463-30451669 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 72 |
| Conread position: | 845-1073 |
| Cow position: | chr19:30349649-30349876 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 845-1073 |
| Cow position: | chr19:33590308-33590063 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 845-1075 |
| Cow position: | chr19:19242646-19242424 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 178, 45 |
| Conread position: | 845-1080 |
| Cow position: | chr19:41504555-41504312 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 846-998 |
| Cow position: | chr19:3631261-3631108 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 846-1037 |
| Cow position: | chr19:14533893-14534093 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 39, 82 |
| Conread position: | 846-1080 |
| Cow position: | chr19:28605767-28606010 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 847-1055 |
| Cow position: | chr19:30747005-30746781 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 847-1075 |
| Cow position: | chr19:55418630-55418407 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 80 |
| Conread position: | 847-1076 |
| Cow position: | chr19:6362870-6362631 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 848-1061 |
| Cow position: | chr19:30385353-30385129 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 32, 79 |
| Conread position: | 848-1072 |
| Cow position: | chr19:55898619-55898389 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 853-1076 |
| Cow position: | chr19:50843824-50843621 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 171, 30 |
| Conread position: | 874-1073 |
| Cow position: | chr19:20700883-20700679 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 9, 48 |
| Conread position: | 885-1008 |
| Cow position: | chr19:12130683-12130805 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 885-1022 |
| Cow position: | chr19:35826937-35826803 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 885-1080 |
| Cow position: | chr19:30188245-30188443 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 886-1058 |
| Cow position: | chr19:36479365-36479203 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 137, 32 |
| Conread position: | 888-1080 |
| Cow position: | chr19:13448698-13448506 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 30 |
| Conread position: | 895-1080 |
| Cow position: | chr19:35026645-35026826 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 129, 23 |
| Conread position: | 913-1072 |
| Cow position: | chr19:51070374-51070529 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 109, 6 |
| Conread position: | 971-1080 |
| Cow position: | chr19:3082531-3082420 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 33 |
Show alignments to all cow chromosomes.