Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 810-1079 |
| Cow position: | chr20:15147315-15147589 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 120 |
| Conread position: | 825-1037 |
| Cow position: | chr20:20350133-20350353 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 830-1080 |
| Cow position: | chr20:5668118-5668380 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 143 |
| Conread position: | 832-1080 |
| Cow position: | chr20:7801479-7801726 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 52, 96 |
| Conread position: | 835-1080 |
| Cow position: | chr20:22420149-22420398 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 8, 95 |
| Conread position: | 836-1080 |
| Cow position: | chr20:23400924-23400685 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 843-1080 |
| Cow position: | chr20:2858983-2858746 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 62 |
| Conread position: | 844-1074 |
| Cow position: | chr20:22919516-22919746 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 844-1074 |
| Cow position: | chr20:36987950-36988187 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 84 |
| Conread position: | 844-1080 |
| Cow position: | chr20:13588511-13588755 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 57 |
| Conread position: | 845-1080 |
| Cow position: | chr20:23421722-23421959 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 845-1080 |
| Cow position: | chr20:33154338-33154575 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 40, 29 |
| Conread position: | 846-1080 |
| Cow position: | chr20:21001910-21002136 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 55, 73 |
| Conread position: | 846-1080 |
| Cow position: | chr20:21403814-21403574 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 847-1080 |
| Cow position: | chr20:30286003-30285767 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 853-1040 |
| Cow position: | chr20:17472958-17473153 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 32, 75 |
| Conread position: | 853-1076 |
| Cow position: | chr20:14864235-14864462 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 75 |
| Conread position: | 862-1066 |
| Cow position: | chr20:20064038-20064240 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 148, 17 |
| Conread position: | 879-1038 |
| Cow position: | chr20:13790595-13790441 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 143, 39 |
| Conread position: | 880-981 |
| Cow position: | chr20:15492383-15492283 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 880-1055 |
| Cow position: | chr20:887524-887352 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 144, 34 |
| Conread position: | 880-1075 |
| Cow position: | chr20:20071948-20072144 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 160 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 135, 26 |
| Conread position: | 880-1080 |
| Cow position: | chr20:7284452-7284259 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 117, 24 |
| Conread position: | 885-1040 |
| Cow position: | chr20:16582693-16582845 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 136, 33 |
| Conread position: | 885-1076 |
| Cow position: | chr20:3376713-3376903 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 885-1080 |
| Cow position: | chr20:10722903-10722718 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 114, 11 |
| Conread position: | 885-1080 |
| Cow position: | chr20:31098300-31098109 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 137, 33 |
| Conread position: | 896-1080 |
| Cow position: | chr20:27844611-27844419 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 922-1076 |
| Cow position: | chr20:24280517-24280371 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 925-1076 |
| Cow position: | chr20:9919027-9918880 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 73 |
Show alignments to all cow chromosomes.