Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 801-1074 |
| Cow position: | chr21:10965754-10965458 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 816-1049 |
| Cow position: | chr21:9976873-9976634 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 43, 85 |
| Conread position: | 824-1022 |
| Cow position: | chr21:28651028-28650820 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 18, 42 |
| Conread position: | 825-1080 |
| Cow position: | chr21:42396663-42396401 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 12, 105 |
| Conread position: | 826-1069 |
| Cow position: | chr21:4192939-4192688 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 28 |
| Conread position: | 830-1080 |
| Cow position: | chr21:23285973-23286225 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 833-1037 |
| Cow position: | chr21:27678686-27678472 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 52, 96 |
| Conread position: | 843-1080 |
| Cow position: | chr21:39074821-39075062 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 845-1037 |
| Cow position: | chr21:26631802-26632005 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 845-1041 |
| Cow position: | chr21:39766589-39766400 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 845-1055 |
| Cow position: | chr21:6282580-6282370 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 845-1061 |
| Cow position: | chr21:16166001-16166222 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 845-1076 |
| Cow position: | chr21:30567311-30567542 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 35, 54 |
| Conread position: | 845-1077 |
| Cow position: | chr21:37170423-37170176 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 79 |
| Conread position: | 845-1080 |
| Cow position: | chr21:15543295-15543531 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 846-1076 |
| Cow position: | chr21:45963059-45962822 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 847-1074 |
| Cow position: | chr21:6667849-6667626 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 847-1079 |
| Cow position: | chr21:38021550-38021317 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 847-1080 |
| Cow position: | chr21:37283171-37282939 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 38, 67 |
| Conread position: | 848-1064 |
| Cow position: | chr21:23399617-23399403 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 880-985 |
| Cow position: | chr21:24972012-24972116 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 880-1073 |
| Cow position: | chr21:27520791-27520992 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 114, 39 |
| Conread position: | 880-1080 |
| Cow position: | chr21:12079827-12079632 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 143, 39 |
| Conread position: | 885-1080 |
| Cow position: | chr21:22941985-22941794 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 165 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 139, 26 |
| Conread position: | 886-1068 |
| Cow position: | chr21:33975255-33975069 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 99, 33 |
| Conread position: | 886-1076 |
| Cow position: | chr21:17671775-17671957 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 135, 32 |
| Conread position: | 919-1080 |
| Cow position: | chr21:16679363-16679203 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 104, 78 |
Show alignments to all cow chromosomes.