Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 806-1080 |
| Cow position: | chr23:25409449-25409182 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 107, 37 |
| Conread position: | 813-1061 |
| Cow position: | chr23:30127118-30127368 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 825-1080 |
| Cow position: | chr23:34514268-34514529 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 9, 105 |
| Conread position: | 826-992 |
| Cow position: | chr23:14751786-14751952 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 826-1080 |
| Cow position: | chr23:23917495-23917232 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 60, 103 |
| Conread position: | 833-1001 |
| Cow position: | chr23:6963570-6963739 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 840-1034 |
| Cow position: | chr23:25078602-25078804 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 16, 60 |
| Conread position: | 845-1058 |
| Cow position: | chr23:9425608-9425828 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 845-1064 |
| Cow position: | chr23:20024067-20023841 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 845-1070 |
| Cow position: | chr23:15694022-15694244 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 155, 40 |
| Conread position: | 845-1076 |
| Cow position: | chr23:39069618-39069858 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 42, 81 |
| Conread position: | 845-1080 |
| Cow position: | chr23:15147408-15147643 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 62, 76 |
| Conread position: | 845-1080 |
| Cow position: | chr23:16171320-16171075 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 845-1080 |
| Cow position: | chr23:24400581-24400830 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 845-1080 |
| Cow position: | chr23:30691428-30691665 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 37, 83 |
| Conread position: | 845-1080 |
| Cow position: | chr23:36483833-36484064 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 40, 80 |
| Conread position: | 846-1078 |
| Cow position: | chr23:39823063-39822828 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 17, 104 |
| Conread position: | 847-1001 |
| Cow position: | chr23:5264954-5265110 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 848-1080 |
| Cow position: | chr23:36674181-36674411 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 48, 138 |
| Conread position: | 849-1076 |
| Cow position: | chr23:1682664-1682434 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 79 |
| Conread position: | 853-1076 |
| Cow position: | chr23:5258923-5258697 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 854-1072 |
| Cow position: | chr23:2330192-2330408 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 31, 131 |
| Conread position: | 856-1079 |
| Cow position: | chr23:9546970-9546751 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 90, 35 |
| Conread position: | 879-1076 |
| Cow position: | chr23:7253770-7253589 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 879-1079 |
| Cow position: | chr23:32845465-32845658 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 145, 39 |
| Conread position: | 880-1044 |
| Cow position: | chr23:14572951-14572788 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 143, 39 |
| Conread position: | 885-1037 |
| Cow position: | chr23:7571120-7571272 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 129, 34 |
| Conread position: | 885-1070 |
| Cow position: | chr23:16479351-16479537 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 885-1074 |
| Cow position: | chr23:35654504-35654690 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 127, 61 |
| Conread position: | 886-1052 |
| Cow position: | chr23:23285637-23285474 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 34 |
| Conread position: | 897-1074 |
| Cow position: | chr23:30301864-30302046 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 922-1074 |
| Cow position: | chr23:32869274-32869424 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 101, 121 |
Show alignments to all cow chromosomes.