Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 804-1076 |
| Cow position: | chr24:17762644-17762928 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 818-1037 |
| Cow position: | chr24:35835435-35835661 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 818-1074 |
| Cow position: | chr24:16552402-16552666 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 825-1076 |
| Cow position: | chr24:6177995-6177741 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 840-1080 |
| Cow position: | chr24:14912998-14913241 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 43, 87 |
| Conread position: | 843-992 |
| Cow position: | chr24:39384370-39384528 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 42, 85 |
| Conread position: | 843-1062 |
| Cow position: | chr24:44483823-44484042 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 42, 76 |
| Conread position: | 843-1080 |
| Cow position: | chr24:1295686-1295930 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 42, 84 |
| Conread position: | 843-1080 |
| Cow position: | chr24:30899245-30899490 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 843-1080 |
| Cow position: | chr24:38644179-38643958 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 180, 38 |
| Conread position: | 845-1055 |
| Cow position: | chr24:42338959-42338741 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 38, 85 |
| Conread position: | 845-1058 |
| Cow position: | chr24:25935144-25934912 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 82 |
| Conread position: | 845-1074 |
| Cow position: | chr24:31301103-31301340 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 145 |
| Conread position: | 845-1075 |
| Cow position: | chr24:17417662-17417424 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 845-1076 |
| Cow position: | chr24:42817839-42817602 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 845-1080 |
| Cow position: | chr24:6423499-6423726 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 845-1080 |
| Cow position: | chr24:19628007-19627752 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 40, 93 |
| Conread position: | 846-1058 |
| Cow position: | chr24:28598799-28599015 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 36, 63 |
| Conread position: | 846-1061 |
| Cow position: | chr24:3089202-3088967 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 40, 55 |
| Conread position: | 847-1080 |
| Cow position: | chr24:41404760-41404994 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 33, 76 |
| Conread position: | 853-1076 |
| Cow position: | chr24:32579741-32579520 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 880-1079 |
| Cow position: | chr24:9866939-9867137 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 882-1055 |
| Cow position: | chr24:31845290-31845462 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 142, 36 |
| Conread position: | 885-1062 |
| Cow position: | chr24:36550543-36550719 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 885-1073 |
| Cow position: | chr24:37385844-37386028 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 894-1080 |
| Cow position: | chr24:21714682-21714864 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 154 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 129, 24 |
| Conread position: | 897-1076 |
| Cow position: | chr24:36853863-36853687 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 124, 22 |
| Conread position: | 907-1068 |
| Cow position: | chr24:43350594-43350753 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 116, 11 |
Show alignments to all cow chromosomes.