Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 809-1045 |
| Cow position: | chr25:34159307-34159554 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 816-1080 |
| Cow position: | chr25:5377035-5377286 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 48, 13 |
| Conread position: | 836-1076 |
| Cow position: | chr25:40832828-40833077 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 90 |
| Conread position: | 844-1074 |
| Cow position: | chr25:33346224-33346000 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 173, 49 |
| Conread position: | 844-1080 |
| Cow position: | chr25:19686154-19686397 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 41, 84 |
| Conread position: | 845-1043 |
| Cow position: | chr25:15564777-15564576 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 40, 124 |
| Conread position: | 845-1043 |
| Cow position: | chr25:16240026-16240237 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 845-1055 |
| Cow position: | chr25:16687515-16687733 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 845-1080 |
| Cow position: | chr25:13704608-13704365 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 37, 83 |
| Conread position: | 845-1080 |
| Cow position: | chr25:14280030-14279794 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 845-1080 |
| Cow position: | chr25:23014743-23014514 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 114, 40 |
| Conread position: | 846-1080 |
| Cow position: | chr25:10009967-10010198 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 36, 79 |
| Conread position: | 847-1070 |
| Cow position: | chr25:13216365-13216140 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 36, 81 |
| Conread position: | 848-1080 |
| Cow position: | chr25:13123807-13123572 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 78 |
| Conread position: | 880-1035 |
| Cow position: | chr25:38358632-38358483 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 143, 15 |
| Conread position: | 880-1080 |
| Cow position: | chr25:17473210-17473016 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 172, 38 |
| Conread position: | 883-1072 |
| Cow position: | chr25:20497332-20497155 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 885-1080 |
| Cow position: | chr25:16940309-16940507 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 34 |
| Conread position: | 886-1022 |
| Cow position: | chr25:28007854-28007988 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 119, 32 |
| Conread position: | 886-1057 |
| Cow position: | chr25:20624347-20624177 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 123, 32 |
| Conread position: | 886-1079 |
| Cow position: | chr25:5567196-5567397 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 32 |
| Conread position: | 899-1022 |
| Cow position: | chr25:16482402-16482282 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 103, 7 |
| Conread position: | 905-1074 |
| Cow position: | chr25:16193007-16193169 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 905-1076 |
| Cow position: | chr25:35037909-35038074 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 118, 13 |
| Conread position: | 909-1080 |
| Cow position: | chr25:30036273-30036100 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 114, 9 |
| Conread position: | 910-1076 |
| Cow position: | chr25:16429242-16429410 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 137 |
Show alignments to all cow chromosomes.